RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 BDKRB2P30411 391 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF84P51523 738 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 FOXG1P55316 489 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ECH1Q13011 328 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 NKPD1Q17RQ9 610 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 SNAI3Q3KNW1 292 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 JMJD6Q6NYC1 403 aaPredicted RBP10.23□□□□□ -0.77
SHMT2-212ENST00000554467 BAIAP2L2Q6UXY1 529 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF813Q6ZN06 617 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 GJC3Q8NFK1 279 aa10.23□□□□□ -0.77
SHMT2-212ENST00000554467 TRAV14DV4A0A0A6YYC5 116 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 A0A1W2PPE3 182 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 C5orf52A6NGY3 159 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 ST8SIA5O15466 376 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 HTR3BO95264 441 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 FSTP19883 344 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 LHX2P50458 406 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 RNFT1Q5M7Z0 435 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 ELFN2Q5R3F8 820 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 SLC36A1Q7Z2H8 476 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM17Q86X19 198 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 OR1S2Q8NGQ3 325 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 MFFQ9GZY8 342 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 PLEKHA1Q9HB21 404 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF230Q9UIE0 474 aaPredicted RBP10.22□□□□□ -0.77
SHMT2-212ENST00000554467 A0A096LPE4 126 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 A0A1W2PP11 408 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 A0A1W2PPZ6 126 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM82A0PJX8 343 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 WISP2O76076 250 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 CD3DP04234 171 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 SP1P08047 785 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 FAHP16930 419 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 PPIAP62937 165 aaKnown RBP10.22□□□□□ -0.77
SHMT2-212ENST00000554467 ARG2P78540 354 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 SORDQ00796 357 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 KCNMB1Q16558 191 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 AVPI1Q5T686 147 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 TUSC5Q8IXB3 177 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 PRSS33Q8NF86 280 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 CHST6Q9GZX3 395 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 GHRLQ9UBU3 117 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 B4GALT7Q9UBV7 327 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 APC2O95996 2303 aa10.22□□□□□ -0.77
SHMT2-212ENST00000554467 MECP2P51608 486 aaKnown RBP10.21□□□□□ -0.77
SHMT2-212ENST00000554467 HGFACQ04756 655 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 PMPCAQ10713 525 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 C10orf91Q5T1B1 145 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 TSPO2Q5TGU0 170 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 NAXEQ8NCW5 288 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 OR5D14Q8NGL3 314 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 FER1L6-AS2Q96M78 137 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 CMTM3Q96MX0 182 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 TMEM235A6NFC5 223 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 HCKP08631 526 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 ZNF32P17041 273 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 OR3A4PP47883 348 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 CLDN18P56856 261 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 LSM6P62312 80 aaKnown RBP10.21□□□□□ -0.77
SHMT2-212ENST00000554467 AWAT2Q6E213 333 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 SVBPQ8N300 66 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 THAP6Q8TBB0 222 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 THRSPQ92748 146 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 PCDHB10Q9UN67 800 aa10.21□□□□□ -0.77
SHMT2-212ENST00000554467 ANKRD20A5PA0PJZ0 165 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 M0R135 149 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 ACTL6AO96019 429 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 RPA2P15927 270 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 BEX5Q5H9J7 111 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 ABLIM2Q6H8Q1 611 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 LIN54Q6MZP7 749 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 ADGRE4PQ86SQ3 457 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 ANGPTL5Q86XS5 388 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 DMRTC2Q8IXT2 367 aaPredicted RBP10.21□□□□□ -0.78
SHMT2-212ENST00000554467 CHST4Q8NCG5 386 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF799Q96GE5 643 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 SF3B5Q9BWJ5 86 aaKnown RBP10.21□□□□□ -0.78
SHMT2-212ENST00000554467 PRRG4Q9BZD6 226 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 BANF2Q9H503 90 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 PRR14LQ5THK1 2151 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 ACACAQ13085 2346 aa10.21□□□□□ -0.78
SHMT2-212ENST00000554467 COLCA2A8K830 154 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 SNRPGP15A8MWD9 76 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 UBE2CO00762 179 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 FAUP35544 74 aaKnown RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF93P35789 620 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 GPX4P36969 197 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 GRB2P62993 217 aaKnown RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 UNC119Q13432 240 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 OR2W3Q7Z3T1 314 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 CD163Q86VB7 1156 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF101Q8IZC7 436 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 MUC20Q8N307 709 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 CPNE4Q96A23 557 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-212ENST00000554467 NICN1Q9BSH3 213 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 MRI1Q9BV20 369 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 TMEM38BQ9NVV0 291 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 RHBDD3Q9Y3P4 386 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 NR2C1P13056 603 aa10.2□□□□□ -0.78
SHMT2-212ENST00000554467 ZNF44P15621 663 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms