RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 TEX15Q9BXT5 2789 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PTPN13Q12923 2485 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 TRAV24A0A0B4J272 114 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PPIAL4CA0A0B4J2A2 164 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 IQCMA0A1B0GVH7 501 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 LOC110117498-PIK3R3F6TDL0 507 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 J3QRE1 110 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 P2RY10O00398 339 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CDC42EP2O14613 210 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SURF4O15260 269 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 NBR2O15453 112 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 HCRTR1O43613 425 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 FGF17O60258 216 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 TNFSF15O95150 251 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 NSA2O95478 260 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 LALBAP00709 142 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 IFI6P09912 130 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CT62P0C5K7 136 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC35G6P0C7Q6 338 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PPIAL4GP0DN37 164 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CTSEP14091 401 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CPMP14384 443 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PVRP15151 417 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PSMA1P25786 263 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 LAP3P28838 519 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 IFNGR2P38484 337 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 UQCRFS1P47985 274 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 TGM4P49221 684 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 WNT4P56705 351 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CLDN15P56746 228 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 FXYD6P3P58550 94 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 RPS25P62851 125 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PSPHP78330 225 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 GLO1Q04760 184 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 ZFP36L1Q07352 338 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 RAB40BQ12829 278 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SELENBP1Q13228 472 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 EXOSC2Q13868 293 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 ELOCQ15369 112 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF79Q15937 498 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PSG3Q16557 428 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PGGHGQ32M88 737 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 DEFB134Q4QY38 66 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 TRMT12Q53H54 448 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 OR2G6Q5TZ20 316 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 H3F3CQ6NXT2 135 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC27A4Q6P1M0 643 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CD200R1LQ6Q8B3 271 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 HSDL2Q6YN16 418 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF730Q6ZMV8 503 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF620Q6ZNG0 422 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 DGAT2L6Q6ZPD8 337 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 MBOAT2Q6ZWT7 520 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 GDPD3Q7L5L3 318 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CLDN22Q8N7P3 220 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PIGXQ8TBF5 258 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 TEX47Q8TBZ9 253 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 DOK4Q8TEW6 326 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PATE1Q8WXA2 126 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PIK3R3Q92569 461 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 DAZLQ92904 295 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 HIST1H2ACQ93077 130 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 TMEM45BQ96B21 275 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 ANKRD9Q96BM1 317 aaPredicted RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 WBP1Q96G27 269 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CCDC3Q9BQI4 270 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC30A2Q9BRI3 323 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 C7orf50Q9BRJ6 194 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 MED18Q9BUE0 208 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 LRRC61Q9BV99 259 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 PIGUQ9H490 435 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 GSN-AS1Q9NRJ2 163 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 NAGKQ9UJ70 344 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF346Q9UL40 294 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SSR3Q9UNL2 185 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 WDR83OSQ9Y284 106 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 YARS2Q9Y2Z4 477 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 EXOSC1Q9Y3B2 195 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CSDC2Q9Y534 153 aaKnown RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SPIN1Q9Y657 262 aaPredicted RBP4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 V9GYH0 126 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 CELSR2Q9HCU4 2923 aa4.45□□□□□ -1.7
MTHFD1-206ENST00000554353 SDK2Q58EX2 2172 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A0G2JNG1 304 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 A0A0J9YY10 115 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 PNMA8CA0A1B0GUJ8 204 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 TRDV1A0A1B0GX56 115 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 IRGMA1A4Y4 181 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 TRAPPC13A5PLN9 417 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 RNF222A6NCQ9 220 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 ZNF860A6NHJ4 632 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 NPIPA3F8WFD2 350 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 J3QKU1 62 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 BHLHE40O14503 412 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 MYL12BO14950 172 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 RS1O15537 224 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 GALR3O60755 368 aaPredicted RBP4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 CDRT1O95170 752 aa4.44□□□□□ -1.7
MTHFD1-206ENST00000554353 SLC2A10O95528 541 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms