RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 TBPP20226 339 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 PTGDSP41222 190 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 RAB1AP62820 205 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 POU3F1Q03052 451 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 C17orf67Q0P5P2 114 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 MOGAT2Q3SYC2 334 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 RPL7L1Q6DKI1 246 aaKnown RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 TMPPEQ6ZT21 453 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 ST7LQ8TDW4 575 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 RNF138Q8WVD3 245 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 ST8SIA1Q92185 356 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 SHDQ96IW2 340 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 KCNK17Q96T54 332 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 S100A13Q99584 98 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 CMKLR1Q99788 373 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 EMC6Q9BV81 110 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 CRLF2Q9HC73 371 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 G6PC2Q9NQR9 355 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 OR5AC2Q9NZP5 309 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 STARD10Q9Y365 291 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 EMC9Q9Y3B6 208 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 MRPS18BQ9Y676 258 aaKnown RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 LDLRAD4O15165 306 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 TOX3O15405 576 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 TSPAN15O95858 294 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 OR8U9P0C7N5 309 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 DAOP14920 347 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 IGFBP3P17936 291 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 EPHA8P29322 1005 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 SULT1A1P50225 295 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 GLO1Q04760 184 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 ZP4Q12836 540 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 KIAA0141Q14154 515 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 TMEM128Q5BJH2 165 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 CYB5R2Q6BCY4 276 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 Q6ZRG5 221 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 H1FNTQ75WM6 255 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 DCXRQ7Z4W1 244 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 OR8U1Q8NH10 309 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 MFSD8Q8NHS3 518 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 POC1BQ8TC44 478 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 TMEM234Q8WY98 164 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 OPN3Q9H1Y3 402 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 BCO1Q9HAY6 547 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 SPACA1Q9HBV2 294 aa10.8□□□□□ -0.68
SHMT2-207ENST00000553837 CGGBP1Q9UFW8 167 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-207ENST00000553837 VSTM2BA6NLU5 285 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 YIF1AO95070 293 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 PTBP3O95758 552 aaKnown RBP10.79□□□□□ -0.68
SHMT2-207ENST00000553837 NR2C1P13056 603 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 RAB6AP20340 208 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 HRH1P35367 487 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 EMP2P54851 167 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 PCK2Q16822 640 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 ZNF260Q3ZCT1 412 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 KCTD18Q6PI47 426 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-207ENST00000553837 BEND2Q8NDZ0 799 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 OR10G3Q8NGC4 313 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 HLA-CQ95604 372 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 ZNF775Q96BV0 537 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-207ENST00000553837 POM121Q96HA1 1249 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 B3GAT1Q9P2W7 334 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 PI4KAP42356 2102 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 ADAMTS9Q9P2N4 1935 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 TMEM238LA0A1B0GVL6 79 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 CXorf65A6NEN9 183 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 LIPT2A6NK58 231 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 NPIPA5E9PKD4 350 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 ARG1P05089 322 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 LINC00614P0C842 121 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 APOBEC1P41238 236 aaKnown RBP10.79□□□□□ -0.68
SHMT2-207ENST00000553837 DHPSP49366 369 aaPredicted RBP10.79□□□□□ -0.68
SHMT2-207ENST00000553837 HSF1Q00613 529 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 TLE3Q04726 772 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 HOGA1Q86XE5 327 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 DEFB123Q8N688 67 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 DTWD2Q8NBA8 298 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 OR10J5Q8NHC4 309 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 MARCH1Q8TCQ1 289 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 CCDC74BQ96LY2 380 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 C20orf24Q9BUV8 137 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 CHST11Q9NPF2 352 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 RAB22AQ9UL26 194 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 NPIPA1Q9UND3 350 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 R4GMQ9 66 aa10.79□□□□□ -0.68
SHMT2-207ENST00000553837 MED12Q93074 2177 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 DCDC2BA2VCK2 349 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 ZNF814B7Z6K7 855 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 OR2J2O76002 312 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 JTBO76095 146 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 HKR1P10072 659 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 FSTP19883 344 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 SNCAP37840 140 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 TNFRSF9Q07011 255 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 OR8G1Q15617 311 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 USF2Q15853 346 aaPredicted RBP10.78□□□□□ -0.68
SHMT2-207ENST00000553837 GUK1Q16774 197 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 CPEB2Q7Z5Q1 589 aaKnown RBP10.78□□□□□ -0.68
SHMT2-207ENST00000553837 GVQW1Q8N7I0 195 aa10.78□□□□□ -0.68
SHMT2-207ENST00000553837 PNLDC1Q8NA58 520 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms