RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 SMLR1H3BR10 107 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CCRL2O00421 344 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 BCKDKO14874 412 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 PFDN6O15212 129 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CHMP2AO43633 222 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CST8O60676 142 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 EIF3GO75821 320 aaKnown RBP eCLIP1.59□□□□□ -2.15
VRK1-202ENST00000553683 OR7A10O76100 309 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 OR2F2O95006 317 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 VAPBO95292 243 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 KRT75O95678 551 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 IFNGP01579 166 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TNNC2P02585 160 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 PPBPP02775 128 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 HLA-DPB1P04440 258 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 IGKV4-1P06312 121 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SERPINE2P07093 398 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 WARSP23381 471 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 S100PP25815 95 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 OTX1P32242 354 aaPredicted RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 SERPINB5P36952 375 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SLCO1A2P46721 670 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CSNK1A1P48729 337 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CDK9P50750 372 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 FBXW4P57775 412 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SEC61GP60059 68 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SEMG2Q02383 582 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 MGAT3Q09327 533 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 IFFO1Q0D2I5 559 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 STX3Q13277 289 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SMCO1Q147U7 214 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TGFBIQ15582 683 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ZNHIT3Q15649 155 aaPredicted RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 TOMM34Q15785 309 aaPredicted RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 VAMP3Q15836 100 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 KCNJ8Q15842 424 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 BSXQ3C1V8 233 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 GPR107Q5VW38 600 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 RAET1LQ5VY80 246 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ELP2Q6IA86 826 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ANKRD26P1Q6NSI1 321 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ZFP1Q6P2D0 407 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ENPP6Q6UWR7 440 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CERS6Q6ZMG9 384 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TEX43Q6ZNM6 134 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SNX20Q7Z614 316 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SCD5Q86SK9 330 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 STK40Q8N2I9 435 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 KIF2BQ8N4N8 673 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TMEM156Q8N614 296 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ACBD4Q8NC06 268 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 NECAP1Q8NC96 275 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 OR4C5Q8NGB2 326 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 KCNG3Q8TAE7 436 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 NEK7Q8TDX7 302 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 C22orf15Q8WYQ4 148 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 MAFIPQ8WZ33 124 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 AP3S1Q92572 193 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 STMN2Q93045 179 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SLC38A4Q969I6 547 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TAMM41Q96BW9 452 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 DGCR14Q96DF8 476 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 SEH1LQ96EE3 360 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CERS2Q96G23 380 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 RNF145Q96MT1 663 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SERPINB12Q96P63 405 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 MS4A4EQ96PG1 132 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 XPO6Q96QU8 1125 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 TGS1Q96RS0 853 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 C12orf57Q99622 126 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 COPS8Q99627 209 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 NIPSNAP1Q9BPW8 284 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 C7orf50Q9BRJ6 194 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 C2orf88Q9BSF0 95 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TIPINQ9BVW5 301 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TEKT3Q9BXF9 490 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 TMEM59Q9BXS4 323 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 OR51M1Q9H341 326 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 PIGUQ9H490 435 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ELOVL6Q9H5J4 265 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CD209Q9NNX6 404 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 OR2S2Q9NQN1 319 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 CHRAC1Q9NRG0 131 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 DDX19AQ9NUU7 478 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 GPATCH2LQ9NWQ4 482 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 MRPL22Q9NWU5 206 aaKnown RBP1.59□□□□□ -2.15
VRK1-202ENST00000553683 TAS2R9Q9NYW1 312 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 STMN3Q9NZ72 180 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 C3orf18Q9UK00 162 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 PSG8Q9UQ74 426 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SLC22A13Q9Y226 551 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 ZNF337Q9Y3M9 751 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 HYOU1Q9Y4L1 999 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 OR51B4Q9Y5P0 310 aa1.59□□□□□ -2.15
VRK1-202ENST00000553683 SHANK3Q9BYB0 1731 aa1.59□□□□□ -2.16
VRK1-202ENST00000553683 CPS1P31327 1500 aa1.59□□□□□ -2.16
VRK1-202ENST00000553683 SCN1AP35498 2009 aa1.59□□□□□ -2.16
VRK1-202ENST00000553683 EYSQ5T1H1 3165 aa1.59□□□□□ -2.16
VRK1-202ENST00000553683 MTUS2Q5JR59 1369 aa1.59□□□□□ -2.16
VRK1-202ENST00000553683 AHDC1Q5TGY3 1603 aaPredicted RBP1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms