RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 SF3B4Q15427 424 aaKnown RBP eCLIP16.93■□□□□ 0.3
SSH1-209ENST00000551165 SLX1AQ9BQ83 275 aa16.93■□□□□ 0.3
SSH1-209ENST00000551165 OR10A4Q9H209 315 aa16.93■□□□□ 0.3
SSH1-209ENST00000551165 GHRLQ9UBU3 117 aa16.93■□□□□ 0.3
SSH1-209ENST00000551165 A0A0A6YYJ9 748 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 FOXI3A8MTJ6 420 aaPredicted RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 SULT1C2O00338 296 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 IGKV3-15P01624 115 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 SFTPBP07988 381 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 CSF1P09603 554 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 CBR1P16152 277 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 PDZK1IP1Q13113 114 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 ZBTB37Q5TC79 503 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 OR52W1Q6IF63 320 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 BTN2A1Q7KYR7 527 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 CCDC36Q8IYA8 594 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 OR2J1Q9GZK6 312 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 C20orf85Q9H1P6 137 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 SCPEP1Q9HB40 452 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 CCNKO75909 580 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 HIST1H1DP16402 221 aaKnown RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 PSMB1P20618 241 aaKnown RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 CEACAM8P31997 349 aaPredicted RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 PTGER4P35408 488 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 GPM6AP51674 278 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 ATP1B3P54709 279 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 ALKBH6Q3KRA9 238 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 STEAP1BQ6NZ63 245 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 GFRALQ6UXV0 394 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 BHLHA15Q7RTS1 189 aaPredicted RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 C1orf162Q8NEQ5 155 aaPredicted RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 BEST4Q8NFU0 473 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 RADILQ96JH8 1075 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 URM1Q9BTM9 101 aaKnown RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 TINAGL1Q9GZM7 467 aaPredicted RBP16.92■□□□□ 0.3
SSH1-209ENST00000551165 CDH20Q9HBT6 801 aa16.92■□□□□ 0.3
SSH1-209ENST00000551165 CST4P01036 141 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 H2AFB2P0C5Z0 115 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 HOXC12P31275 282 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 RSU1Q15404 277 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 ALKBH2Q6NS38 261 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 CDH24Q86UP0 819 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 OR56B1Q8NGI3 324 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 OR6F1Q8NGZ6 308 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 BOD1Q96IK1 185 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 METTL9Q9H1A3 318 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 NPAP1Q9NZP6 1156 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 PQLC2LA1A4F0 135 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 NAP1L6A6NFF2 107 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 C3orf80F5H4A9 247 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 MFNGO00587 321 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 GABRR1P24046 479 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 BLVRBP30043 206 aaPredicted RBP16.91■□□□□ 0.3
SSH1-209ENST00000551165 NPBWR2P48146 333 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 PPP1CBP62140 327 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 BTG1P62324 171 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 P2RY6Q15077 328 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 ASCL4Q6XD76 172 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 BEND4Q6ZU67 534 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 OR51S1Q8NGJ8 323 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 TAS2R8Q9NYW2 309 aa16.91■□□□□ 0.3
SSH1-209ENST00000551165 HMX3A6NHT5 357 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 CRHP06850 196 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 CECR9P0C854 216 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 AKAIN1P0CW23 69 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 UCNP55089 124 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 ACTBP60709 375 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 ACTG1P63261 375 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 PDCD1Q15116 288 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 TAF9Q16594 264 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 PIGYQ3MUY2 71 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 ZDHHC23Q8IYP9 409 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 ST6GAL2Q96JF0 529 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 Q96M66 194 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 NUDT16L1Q9BRJ7 211 aaKnown RBP16.9■□□□□ 0.3
SSH1-209ENST00000551165 TM2D1Q9BX74 207 aa16.9■□□□□ 0.3
SSH1-209ENST00000551165 TP63Q9H3D4 680 aaPredicted RBP16.9■□□□□ 0.3
SSH1-209ENST00000551165 OR5H1A6NKK0 313 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 ARPC1BO15143 372 aaKnown RBP16.89■□□□□ 0.3
SSH1-209ENST00000551165 HOXB1P14653 301 aaPredicted RBP16.89■□□□□ 0.3
SSH1-209ENST00000551165 BMP5P22003 454 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 UCP2P55851 309 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 CEACAM21Q3KPI0 293 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 SIGIRRQ6IA17 410 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 ZNF782Q6ZMW2 699 aaPredicted RBP16.89■□□□□ 0.3
SSH1-209ENST00000551165 SLC25A26Q70HW3 274 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 C6orf201Q7Z4U5 140 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 ZNF611Q8N823 705 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 OR5L1Q8NGL2 311 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 OR51F2Q8NH61 342 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 SLC25A40Q8TBP6 338 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 COPZ2Q9P299 210 aa16.89■□□□□ 0.3
SSH1-209ENST00000551165 ATRXP46100 2492 aa16.89■□□□□ 0.29
SSH1-209ENST00000551165 ZNF732B4DXR9 585 aa16.89■□□□□ 0.29
SSH1-209ENST00000551165 F8VVB4 439 aa16.89■□□□□ 0.29
SSH1-209ENST00000551165 F8VWA3 439 aa16.89■□□□□ 0.29
SSH1-209ENST00000551165 SCGNO76038 276 aa16.89■□□□□ 0.29
SSH1-209ENST00000551165 CA6P23280 308 aa16.89■□□□□ 0.29
SSH1-209ENST00000551165 TMEM229BQ8NBD8 167 aa16.89■□□□□ 0.29
SSH1-209ENST00000551165 CSNK2A3Q8NEV1 391 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms