RNA–Protein interactions for RNA: ENST00000550290.2

AC048341.2-201, humanhuman

TSL 4 BASIC

Gene AC048341.2, Length 8,693 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC048341.2-201ENST00000550290 PEX16Q9Y5Y5 336 aa4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 TFP02787 698 aa4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 MFGE8Q08431 387 aaPredicted RBP4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 GPR50Q13585 617 aa4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 FAM216BQ8N7L0 139 aa4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 C11orf24Q96F05 449 aaPredicted RBP4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 MND1Q9BWT6 205 aa4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 SELENOKQ9Y6D0 94 aa4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 R4GMQ9 66 aa4.74□□□□□ -1.65
AC048341.2-201ENST00000550290 ANKRD11Q6UB99 2663 aaPredicted RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 LILRA1O75019 489 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 HOXB1P14653 301 aaPredicted RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 VEGFCP49767 419 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 TMEM123Q8N131 208 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 MRPS28Q9Y2Q9 187 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ZNF879B4DU55 563 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 NPIPB8E9PQR5 432 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 PRODHO43272 600 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ACSM4P0C7M7 580 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 DEFA4P12838 97 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 CD33P20138 364 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 PRDX2P32119 198 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 OR3A3P47888 321 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 RPS16P62249 146 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 CENPSQ8N2Z9 138 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 UBAC2Q8NBM4 344 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ACOT12Q8WYK0 555 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 PAK1IP1Q9NWT1 392 aaPredicted RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 COL12A1Q99715 3063 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 OR2AT4A6NND4 320 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 UBCP0CG48 685 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 IL3RAP26951 378 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 MVDP53602 400 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 OLFML2AQ68BL7 652 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 COLCA1Q6ZS62 124 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SSX9Q7RTT3 188 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 GPR148Q8TDV2 347 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SSX3Q99909 188 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 PPP1R3EQ9H7J1 279 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ZNF221Q9UK13 617 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 RAI1Q7Z5J4 1906 aaPredicted RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SPTAN1Q13813 2472 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SIAH2O43255 324 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SYNGR1O43759 233 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 CLPXO76031 633 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 CLDN12P56749 244 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 LSM6P62312 80 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 STEAP1Q9UHE8 339 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 DAPK2Q9UIK4 370 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 HAND1O96004 215 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SFTPBP07988 381 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 MRPS34P82930 218 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ZNF679Q8IYX0 411 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 OR8D4Q8NGM9 314 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 CDCA4Q9BXL8 241 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 DCLRE1BQ9H816 532 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ZC4H2Q9NQZ6 224 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 EXOSC1Q9Y3B2 195 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 LHFPL6Q9Y693 200 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 CEACAM18A8MTB9 384 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ACOT8O14734 319 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 IGHV4-31P0DP07 118 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 PRRX1P54821 245 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 MAPK11Q15759 364 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SMN1Q16637 294 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ADPRHL1Q8NDY3 354 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 DNAJC9Q8WXX5 260 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 C1orf159Q96HA4 380 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 C6orf62Q9GZU0 229 aaPredicted RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 WDR13Q9H1Z4 485 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 ZMAT3Q9HA38 289 aaKnown RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 B3GNT2Q9NY97 397 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 LINC00527Q9UJ94 153 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 KLHDC2Q9Y2U9 406 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SH2D7A6NKC9 451 aaPredicted RBP4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SPINT2O43291 252 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 TMEM33P57088 247 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SPRNQ5BIV9 151 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 OR52I1Q8NGK6 324 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 OTOSQ8NHW6 89 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SGK3Q96BR1 496 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 OPA3Q9H6K4 179 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 HEXA-AS1Q9H8Q6 139 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 PALMDQ9NP74 551 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 SPATA2Q9UM82 520 aa4.73□□□□□ -1.65
AC048341.2-201ENST00000550290 IGKV3D-15A0A087WSY6 115 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 AIPO00170 330 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 SLC33A1O00400 549 aaPredicted RBP4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 IFNA6P05013 189 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 PPOXP50336 477 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 ENDOGQ14249 297 aaKnown RBP4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 WDR38Q5JTN6 314 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 MEDAGQ5VYS4 303 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 OIT3Q8WWZ8 545 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 COPS3Q9UNS2 423 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 LIPFP07098 398 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 OR2T7P0C7T2 308 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 GADD45AP24522 165 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 AQP4P55087 323 aa4.72□□□□□ -1.65
AC048341.2-201ENST00000550290 SLC35D3Q5M8T2 416 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms