RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 FAM19A1Q7Z5A9 133 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 SETD3Q86TU7 594 aaPredicted RBP2.55□□□□□ -2
SNRPF-202ENST00000549580 SPATA24Q86W54 205 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 UBALD2Q8IYN6 164 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 SLC34A3Q8N130 599 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 DRAM1Q8N682 238 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 ENKURQ8TC29 256 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 NT5CQ8TCD5 201 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 IFT81Q8WYA0 676 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 GTF2H4Q92759 462 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 TMEM159Q96B96 161 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 ZNF75AQ96N20 296 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 ZNF396Q96N95 335 aaPredicted RBP2.55□□□□□ -2
SNRPF-202ENST00000549580 ZFP3Q96NJ6 502 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 SERPINB11Q96P15 392 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 MED10Q9BTT4 135 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 BBS2Q9BXC9 721 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 PRORYQ9H606 182 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 PLEKHF2Q9H8W4 249 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 EXOSC4Q9NPD3 245 aaKnown RBP2.55□□□□□ -2
SNRPF-202ENST00000549580 NRBP2Q9NSY0 501 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 TMEM100Q9NV29 134 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 ENPP5Q9UJA9 477 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 WIF1Q9Y5W5 379 aa2.55□□□□□ -2
SNRPF-202ENST00000549580 CCL15-CCL14A0A0B4J2E2 113 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 J3QT63 122 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 PLPP3O14495 311 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 RBFOX2O43251 390 aaKnown RBP eCLIP2.54□□□□□ -2
SNRPF-202ENST00000549580 EIF1BO60739 113 aaKnown RBP2.54□□□□□ -2
SNRPF-202ENST00000549580 FOXH1O75593 365 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 VAMP5O95183 116 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 CD74P04233 296 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 PAX6P26367 422 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 UGT2B10P36537 528 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 OPRK1P41145 380 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 EIF1P41567 113 aaKnown RBP2.54□□□□□ -2
SNRPF-202ENST00000549580 OR2B6P58173 313 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 C16orf72Q14CZ0 275 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 GUSBP1Q15486 140 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 TOMM34Q15785 309 aaPredicted RBP2.54□□□□□ -2
SNRPF-202ENST00000549580 CCL15Q16663 113 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 SLC25A35Q3KQZ1 300 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 CDNFQ49AH0 187 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 SYT6Q5T7P8 510 aaPredicted RBP2.54□□□□□ -2
SNRPF-202ENST00000549580 NANOGP8Q6NSW7 305 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 LRRC6Q86X45 466 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 ATPAF2Q8N5M1 289 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 CYB561A3Q8NBI2 242 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 OR1L1Q8NH94 360 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 C17orf50Q8WW18 174 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 VAT1Q99536 393 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 CTRCQ99895 268 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 TMBIM4Q9HC24 238 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 MS4A12Q9NXJ0 267 aa2.54□□□□□ -2
SNRPF-202ENST00000549580 IGHV6-1A0A0B4J1U7 121 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 TRAV8-6A0A0B4J262 113 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 SLC5A10A0PJK1 596 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 GOLGA8IPA6NC78 632 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 M0R1X1 148 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 TCAPO15273 167 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 CALUO43852 315 aaPredicted RBP2.53□□□□□ -2
SNRPF-202ENST00000549580 CCDC22O60826 627 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 MED6O75586 246 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 IGKV1D-16P01601 117 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 IGLV3-25P01717 112 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 CD8AP01732 235 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 TPM3P06753 285 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 ADRA2AP08913 450 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 C1GALT1C1LP0DN25 315 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 SYT1P21579 422 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 PSMB2P49721 201 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 TPM4P67936 248 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 IL5RAQ01344 420 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 TRDNQ13061 729 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 PMS2P3Q13401 168 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 PTGES3Q15185 160 aaKnown RBP2.53□□□□□ -2
SNRPF-202ENST00000549580 OR4D1Q15615 310 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 HSP90B2PQ58FF3 399 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 TEX30Q5JUR7 227 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 IDNKQ5T6J7 187 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 HHATQ5VTY9 493 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 GUSBP11Q6P575 273 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 Q6ZSR6 202 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 AHSA2Q719I0 299 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 ZCCHC24Q8N2G6 241 aaKnown RBP2.53□□□□□ -2
SNRPF-202ENST00000549580 TMEM256Q8N2U0 113 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 ZNF645Q8N7E2 425 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 OR8G5Q8NG78 346 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 OR51Q1Q8NH59 317 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 LINC01560Q8TB33 94 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 SFXN5Q8TD22 340 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 LRRC45Q96CN5 670 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 SLC38A1Q9H2H9 487 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 MAT2BQ9NZL9 334 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 CYB5R1Q9UHQ9 305 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 PPIL1Q9Y3C6 166 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 ORC6Q9Y5N6 252 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 FADS3Q9Y5Q0 445 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 RFNGQ9Y644 331 aa2.53□□□□□ -2
SNRPF-202ENST00000549580 SIGLEC1Q9BZZ2 1709 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms