RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 DYNLT1P63172 113 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 TPM4P67936 248 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 SLC25A11Q02978 314 aaKnown RBP2.66□□□□□ -1.98
PTCH1-216ENST00000548379 UNC119Q13432 240 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 TFDP2Q14188 446 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 TAF1AQ15573 450 aaPredicted RBP2.66□□□□□ -1.98
PTCH1-216ENST00000548379 TTC19Q6DKK2 380 aaPredicted RBP2.66□□□□□ -1.98
PTCH1-216ENST00000548379 FRMPD2BQ6IN97 320 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 SHISA6Q6ZSJ9 500 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 PID1Q7Z2X4 250 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 SNX20Q7Z614 316 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 RNF175Q8N4F7 328 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 DNAAF3Q8N9W5 541 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 OR11G2Q8NGC1 345 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 OR1N2Q8NGR9 330 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 OR2G3Q8NGZ4 309 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 OR6X1Q8NH79 312 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 MCOLN3Q8TDD5 553 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 SLC38A4Q969I6 547 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 RNF185Q96GF1 192 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 PPP1R2P1Q96PQ5 205 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 RNF157Q96PX1 679 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 TRIB3Q96RU7 358 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 VAT1Q99536 393 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 SELENOSQ9BQE4 189 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 CHRNA10Q9GZZ6 450 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 RACGAP1Q9H0H5 632 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 DNTTIP1Q9H147 329 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 XKR8Q9H6D3 395 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 FAM60AQ9NP50 221 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 KCNJ16Q9NPI9 418 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 C14orf105Q9NVL8 296 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 EURLQ9NYK6 297 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 PSMC3IPQ9P2W1 217 aaPredicted RBP2.66□□□□□ -1.98
PTCH1-216ENST00000548379 PEF1Q9UBV8 284 aaKnown RBP2.66□□□□□ -1.98
PTCH1-216ENST00000548379 C3orf18Q9UK00 162 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 STARD10Q9Y365 291 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 MYO9AB2RTY4 2548 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 ANAPC1Q9H1A4 1944 aa2.66□□□□□ -1.98
PTCH1-216ENST00000548379 ARHGAP21Q5T5U3 1957 aa2.65□□□□□ -1.98
PTCH1-216ENST00000548379 IGHV3-64DA0A0J9YX35 117 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 LOC285095A0A1B0GVY8 99 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 NKX2-6A6NCS4 301 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 GOLGA8TH3BQL2 631 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PEX7O00628 323 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 TXNDC9O14530 226 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF189O75820 626 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PROSCO94903 275 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 H6PDO95479 791 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SERPIND1P05546 499 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 RHOXF2BP0C7M4 288 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 GKN3PP0CG01 181 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF24P17028 368 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 MAGP20916 626 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 CD9P21926 228 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 KDELR1P24390 212 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 IFNA8P32881 189 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 LHX2P50458 406 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF133P52736 654 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SUB1P53999 127 aaKnown RBP eCLIP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 CRISP3P54108 245 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 VSX2P58304 361 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 TMED2Q15363 201 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SGCAQ16586 387 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF621Q6ZSS3 439 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 H2AFVQ71UI9 128 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 MKXQ8IYA7 352 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PRSS58Q8IYP2 241 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PUSL1Q8N0Z8 303 aaKnown RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 MS4A15Q8N5U1 240 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PQLC3Q8N755 202 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ZNF433Q8N7K0 673 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 OR4K2Q8NGD2 314 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 OR5AR1Q8NGP9 310 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 OR5K2Q8NHB8 316 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 GPR151Q8TDV0 419 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PHF10Q8WUB8 498 aaKnown RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SKA2Q8WVK7 121 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SRSF12Q8WXF0 261 aaKnown RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 RERGQ96A58 199 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 C8orf44Q96CB5 159 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 HAUS1Q96CS2 278 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 RMND5BQ96G75 393 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 FOPNLQ96NB1 174 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 FOXC2Q99958 501 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 RHOXF2Q9BQY4 288 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 UTP23Q9BRU9 249 aaKnown RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 C20orf24Q9BUV8 137 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 STMN4Q9H169 189 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 OR52A5Q9H2C5 316 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 INPP5EQ9NRR6 644 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ZNHIT6Q9NWK9 470 aaKnown RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SLC25A37Q9NYZ2 338 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PDP1Q9P0J1 537 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 UVRAGQ9P2Y5 699 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 CTSFQ9UBX1 484 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 PACSIN2Q9UNF0 486 aaPredicted RBP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 TRAPPC4Q9Y296 219 aa2.65□□□□□ -1.99
PTCH1-216ENST00000548379 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.65□□□□□ -1.99
PTCH1-216ENST00000548379 ARL5AQ9Y689 179 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms