RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TTRP02766 147 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 PSG2P11465 335 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 FAHP16930 419 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 NDUFB7P17568 137 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 GLRA1P23415 457 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 GABRA2P47869 451 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 GNG3P63215 75 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 RIPPLY1Q0D2K3 151 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 AADACL4Q5VUY2 407 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 C17orf107Q6ZR85 190 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 C1orf122Q6ZSJ8 110 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 MEPCEQ7L2J0 689 aaKnown RBP10.93□□□□□ -0.66
CPSF6-204ENST00000547486 CMTM4Q8IZR5 234 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 OR5A2Q8NGI9 324 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 AQP3Q92482 292 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 DUS3LQ96G46 650 aaKnown RBP10.93□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF488Q96MN9 340 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 CITED1Q99966 193 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 APOL4Q9BPW4 351 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 PIGLQ9Y2B2 252 aa10.93□□□□□ -0.66
CPSF6-204ENST00000547486 CAV3P56539 151 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 RPL15P61313 204 aaKnown RBP10.92□□□□□ -0.66
CPSF6-204ENST00000547486 HCP5Q6MZN7 132 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 HAGHLQ6PII5 290 aaPredicted RBP10.92□□□□□ -0.66
CPSF6-204ENST00000547486 Q6ZSV7 163 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 THAP5Q7Z6K1 395 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 COMMD2Q86X83 199 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 ZSCAN4Q8NAM6 433 aaPredicted RBP10.92□□□□□ -0.66
CPSF6-204ENST00000547486 OR5K1Q8NHB7 308 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF671Q8TAW3 534 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 NPRL2Q8WTW4 380 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 C17orf50Q8WW18 174 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 ASB17Q8WXJ9 295 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 DNAJC9Q8WXX5 260 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 DPAGT1Q9H3H5 408 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 ADGRL4Q9HBW9 690 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 ZNRD1Q9P1U0 126 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 NUFIP1Q9UHK0 495 aaKnown RBP10.92□□□□□ -0.66
CPSF6-204ENST00000547486 RNF114Q9Y508 228 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 TMEM14AQ9Y6G1 99 aa10.92□□□□□ -0.66
CPSF6-204ENST00000547486 A0A1B0GTI1 187 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 A6NIN4 97 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 OR5B21A6NL26 309 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 SYNGR1O43759 233 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 MTRF1O75570 445 aaKnown RBP10.91□□□□□ -0.66
CPSF6-204ENST00000547486 NRASP01111 189 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 ATP6V1B1P15313 513 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 RIDAP52758 137 aaKnown RBP10.91□□□□□ -0.66
CPSF6-204ENST00000547486 PROK1P58294 105 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 CXCR4P61073 352 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 ESRRGP62508 458 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 GUCA2AQ02747 115 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 LCN1P1Q5VSP4 162 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 SLX4IPQ5VYV7 408 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 PLCXD3Q63HM9 321 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF322Q6U7Q0 402 aaPredicted RBP10.91□□□□□ -0.66
CPSF6-204ENST00000547486 PLEKHG7Q6ZR37 379 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 CD177Q8N6Q3 437 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 TCEANCQ8N8B7 351 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 SDSLQ96GA7 329 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 AJUBAQ96IF1 538 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 CNN2Q99439 309 aaKnown RBP10.91□□□□□ -0.66
CPSF6-204ENST00000547486 C19orf12Q9NSK7 152 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 ENPP5Q9UJA9 477 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 IKZF2Q9UKS7 526 aa10.91□□□□□ -0.66
CPSF6-204ENST00000547486 A0A1W2PQ09 198 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 MEIOCA2RUB1 952 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 RFPL4AA6NLU0 287 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ZAR1LA6NP61 321 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 RFPL4AL1F8VTS6 287 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 M0R1W7 72 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 DYNC1I1O14576 645 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 DHRS3O75911 302 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 CLPXO76031 633 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 FBP1P09467 338 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 EEF1B2P24534 225 aaKnown RBP10.9□□□□□ -0.66
CPSF6-204ENST00000547486 SAA4P35542 130 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 UBE2E1P51965 193 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ERVFRD-1P60508 538 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 DEFA6Q01524 100 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 BNIP1Q12981 228 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ATP6AP1Q15904 470 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ZNF829Q3KNS6 432 aaPredicted RBP10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ZBTB37Q5TC79 503 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 TMEM42Q69YG0 159 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 C12orf73Q69YU5 71 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ASPHD2Q6ICH7 369 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 BRICD5Q6PL45 260 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ACP7Q6ZNF0 438 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 SSX6Q7RTT6 188 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 SLC35F2Q8IXU6 374 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ELMOD2Q8IZ81 293 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 BATF2Q8N1L9 274 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 POC1AQ8NBT0 407 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 TMEM185AQ8NFB2 350 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 TMEM163Q8TC26 289 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 ITFG2Q969R8 447 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 IL4I1Q96RQ9 567 aa10.9□□□□□ -0.66
CPSF6-204ENST00000547486 METTL8Q9H825 291 aaKnown RBP10.9□□□□□ -0.66
CPSF6-204ENST00000547486 GPR173Q9NS66 373 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms