RNA–Protein interactions for RNA: ENST00000546803.5

CCDC38-203, Transcript of coiled-coil domain containing 38, humanhuman

TSL 4

Gene CCDC38, Length 511 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-203ENST00000546803 TSEN15Q8WW01 171 aaKnown RBP14.09□□□□□ -0.15
CCDC38-203ENST00000546803 AQP3Q92482 292 aa14.09□□□□□ -0.15
CCDC38-203ENST00000546803 SGCDQ92629 289 aa14.09□□□□□ -0.15
CCDC38-203ENST00000546803 GHSRQ92847 366 aa14.09□□□□□ -0.15
CCDC38-203ENST00000546803 SPSB1Q96BD6 273 aa14.09□□□□□ -0.15
CCDC38-203ENST00000546803 TMEM246Q9BRR3 403 aa14.09□□□□□ -0.15
CCDC38-203ENST00000546803 YTHDF1Q9BYJ9 559 aaKnown RBP14.09□□□□□ -0.15
CCDC38-203ENST00000546803 METTL17Q9H7H0 456 aaPredicted RBP14.09□□□□□ -0.15
CCDC38-203ENST00000546803 MIOXQ9UGB7 285 aa14.09□□□□□ -0.15
CCDC38-203ENST00000546803 CEACAM18A8MTB9 384 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 SRRM5B3KS81 715 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 F5H0A9 414 aaPredicted RBP14.08□□□□□ -0.16
CCDC38-203ENST00000546803 J3QT63 122 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 PLPP2O43688 288 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 ALX3O95076 343 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 TGFAP01135 160 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 CD2P06729 351 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 MUC1P15941 1255 aaPredicted RBP14.08□□□□□ -0.16
CCDC38-203ENST00000546803 HAAOP46952 286 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 SPHARQ15513 63 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 YIF1BQ5BJH7 314 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 TEX36Q5VZQ5 186 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 SFRP4Q6FHJ7 346 aaPredicted RBP14.08□□□□□ -0.16
CCDC38-203ENST00000546803 FAM166AQ6J272 317 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 DCDC5Q6ZRR9 648 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 DEFB108BQ8NET1 73 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 OR5D14Q8NGL3 314 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 OR51F2Q8NH61 342 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 C12orf43Q96C57 262 aaKnown RBP14.08□□□□□ -0.16
CCDC38-203ENST00000546803 BORCS8Q96FH0 119 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 PKIBQ9C010 78 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 CCDC90BQ9GZT6 254 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 ZCCHC4Q9H5U6 513 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 POLDIP2Q9Y2S7 368 aa14.08□□□□□ -0.16
CCDC38-203ENST00000546803 FAM230AA0A1W2PPH8 454 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 A8MV72 311 aaPredicted RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 FAM157AC9JC47 383 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 C3orf80F5H4A9 247 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 MRPS14O60783 128 aaKnown RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 MT-ND2P03891 347 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 MSMBP08118 114 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 WNT2P09544 360 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 OCM2P0CE71 109 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 OCMP0CE72 109 aaPredicted RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 ZNF16P17020 682 aaPredicted RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 EGR1P18146 543 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 CELP19835 753 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 EEF1B2P24534 225 aaKnown RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 CD80P33681 288 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 RBP2P50120 134 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 DVL1P1P54792 670 aaPredicted RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 MICBQ29980 383 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 NLRC3Q7RTR2 1065 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 ZFP41Q8N8Y5 198 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 TRMT10AQ8TBZ6 339 aaKnown RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 RGP1Q92546 391 aaPredicted RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 PGLYRP3Q96LB9 341 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 YAE1D1Q9NRH1 226 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 KCNS2Q9ULS6 477 aa14.07□□□□□ -0.16
CCDC38-203ENST00000546803 LSM2Q9Y333 95 aaKnown RBP14.07□□□□□ -0.16
CCDC38-203ENST00000546803 TRAV20A0A0B4J274 112 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 IGKV1-9A0A0C4DH69 117 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 FOXH1O75593 365 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 RHBDL1O75783 438 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 ACAA1P09110 424 aaPredicted RBP14.06□□□□□ -0.16
CCDC38-203ENST00000546803 RPS2P15880 293 aaKnown RBP14.06□□□□□ -0.16
CCDC38-203ENST00000546803 MPZP25189 248 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 AZGP1P25311 298 aaKnown RBP14.06□□□□□ -0.16
CCDC38-203ENST00000546803 ATP1B3P54709 279 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 GABARAPL2P60520 117 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 MED22Q15528 200 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 LHFPL2Q6ZUX7 228 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 Q71RC1 249 aaPredicted RBP14.06□□□□□ -0.16
CCDC38-203ENST00000546803 C19orf18Q8NEA5 215 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 OR8B3Q8NGG8 313 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 NPRL2Q8WTW4 380 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 NEIL1Q96FI4 390 aaPredicted RBP14.06□□□□□ -0.16
CCDC38-203ENST00000546803 OR5M11Q96RB7 305 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 OR8B2Q96RD0 313 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 RASL12Q9NYN1 266 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 LRCH1Q9Y2L9 728 aa14.06□□□□□ -0.16
CCDC38-203ENST00000546803 TRBV5-5A0A0J9YX44 114 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.05□□□□□ -0.16
CCDC38-203ENST00000546803 TNFRSF13BO14836 293 aaPredicted RBP14.05□□□□□ -0.16
CCDC38-203ENST00000546803 AKR7A2O43488 359 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 NOS1APO75052 506 aaPredicted RBP14.05□□□□□ -0.16
CCDC38-203ENST00000546803 PCMT1P22061 227 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 GLRA1P23415 457 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 SOX2P48431 317 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 MTCP1P56278 107 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 HOXA4Q00056 320 aaPredicted RBP14.05□□□□□ -0.16
CCDC38-203ENST00000546803 IL24Q13007 206 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 GPR50Q13585 617 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 ESCO2Q56NI9 601 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 GLCCI1Q86VQ1 547 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 ANGPTL5Q86XS5 388 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 FAM90A1Q86YD7 464 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 POC1AQ8NBT0 407 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 OR13C9Q8NGT0 318 aa14.05□□□□□ -0.16
CCDC38-203ENST00000546803 THRSPQ92748 146 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms