RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 HHLA2Q9UM44 414 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 PIGLQ9Y2B2 252 aa5.37□□□□□ -1.55
PRKDC-211ENST00000546304 MED13LQ71F56 2210 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 TRIM64A6NGJ6 449 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ANXA2P2A6NMY6 339 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 NDUFS7O75251 213 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 LY6HO94772 140 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CST4P01036 141 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 HLA-DPB1P04440 258 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CD55P08174 381 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 RPSAP08865 295 aaKnown RBP5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CPEP16870 476 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF12P17014 697 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF20P17024 532 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CELP19835 753 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CA6P23280 308 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 TNFSF4P23510 183 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 MAGEB1P43366 347 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CCL8P80075 99 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 TNFAIP6P98066 277 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-211ENST00000546304 SLC3A1Q07837 685 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ACSM1Q08AH1 577 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 RIPPLY1Q0D2K3 151 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 MLLT11Q13015 90 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-211ENST00000546304 OR8G1Q15617 311 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 TSTQ16762 297 aaKnown RBP5.36□□□□□ -1.55
PRKDC-211ENST00000546304 Q5PR19 223 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 DMKNQ6E0U4 476 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-211ENST00000546304 Q6ZSR3 168 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ZDHHC23Q8IYP9 409 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 RDH10Q8IZV5 341 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 LRRC75A-AS1Q8N1F1 130 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 OR51A4Q8NGJ6 313 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 OR13C3Q8NGS6 347 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 OR14K1Q8NGZ2 314 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 OR13G1Q8NGZ3 307 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 GPR148Q8TDV2 347 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 TSEN15Q8WW01 171 aaKnown RBP5.36□□□□□ -1.55
PRKDC-211ENST00000546304 HPSE2Q8WWQ2 592 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 FCGR1BQ92637 280 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 UFD1Q92890 307 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ITFG2Q969R8 447 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 OR2V2Q96R30 315 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CHST5Q9GZS9 411 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF696Q9H7X3 374 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ABCB9Q9NP78 766 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ACOT13Q9NPJ3 140 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 TMEM100Q9NV29 134 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 NKIRAS2Q9NYR9 191 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 ENPP5Q9UJA9 477 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 RHBDD3Q9Y3P4 386 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 SIRT4Q9Y6E7 314 aaPredicted RBP5.36□□□□□ -1.55
PRKDC-211ENST00000546304 V9GYS6 101 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CR1P17927 2039 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 CSPG4Q6UVK1 2322 aa5.36□□□□□ -1.55
PRKDC-211ENST00000546304 NSD1Q96L73 2696 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 TEP1Q99973 2627 aaKnown RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 WNK2Q9Y3S1 2297 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 ANKRD61A6NGH8 418 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF850A8MQ14 1090 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 F5H5P2 479 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 H0YL77 283 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 OGG1O15527 345 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 PLPP2O43688 288 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 GMDSO60547 372 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 LMX1BO60663 402 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 GATBO75879 557 aaKnown RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 CD2P06729 351 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 CSF3P09919 207 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 HSMCR30P0CW71 290 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 PCMT1P22061 227 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 PSMB9P28065 219 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 CD200P41217 278 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 SRP9P49458 86 aaKnown RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 EFNA4P52798 201 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 ART1P52961 327 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 EMX1Q04741 257 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 PRDX4Q13162 271 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 YIF1BQ5BJH7 314 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 CEP78Q5JTW2 689 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 CLVS2Q5SYC1 327 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 UBE2UQ5VVX9 321 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 LIPKQ5VXJ0 399 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 PLCXD3Q63HM9 321 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 TMEM42Q69YG0 159 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 SPARTQ8N0X7 666 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 ZNF525Q8N782 197 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 TSPAN14Q8NG11 270 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 OR13C5Q8NGS8 318 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 OR8S1Q8NH09 359 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 ITLN1Q8WWA0 313 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 NEU4Q8WWR8 484 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 PP6455Q8WZ26 134 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 GHSRQ92847 366 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 C10orf35Q96D05 121 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 ADAT3Q96EY9 351 aaPredicted RBP5.35□□□□□ -1.55
PRKDC-211ENST00000546304 OPALINQ96PE5 141 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 MGLLQ99685 303 aa5.35□□□□□ -1.55
PRKDC-211ENST00000546304 FOXC2Q99958 501 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms