RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 OOEPA6NGQ2 149 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 CEACAM18A8MTB9 384 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 DENRO43583 198 aaKnown RBP14.1□□□□□ -0.15
LTBR-215ENST00000546296 FSTL3O95633 263 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 LALBAP00709 142 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 LHBP01229 141 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 CRHBPP24387 322 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 HAAOP46952 286 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 FUT6P51993 359 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 SLC35A2P78381 396 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 CNN3Q15417 329 aaKnown RBP14.1□□□□□ -0.15
LTBR-215ENST00000546296 ZNF404Q494X3 552 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 FAM166AQ6J272 317 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 GCSAMQ8N6F7 178 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 ZNF485Q8NCK3 441 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 OR10Z1Q8NGY1 313 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 GPR148Q8TDV2 347 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 GHSRQ92847 366 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 SMIM19Q96E16 107 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 C1orf159Q96HA4 380 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 DUSP21Q9H596 190 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 PATZ1Q9HBE1 687 aaKnown RBP14.1□□□□□ -0.15
LTBR-215ENST00000546296 MIOXQ9UGB7 285 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 ZNF281Q9Y2X9 895 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 CR1P17927 2039 aa14.1□□□□□ -0.15
LTBR-215ENST00000546296 MTORP42345 2549 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 TANC2Q9HCD6 1990 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 IGHV3OR15-7A0A075B7D8 119 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 PNMA8CA0A1B0GUJ8 204 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 A8MV72 311 aaPredicted RBP14.09□□□□□ -0.15
LTBR-215ENST00000546296 AKR7A2O43488 359 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 RPS2P15880 293 aaKnown RBP14.09□□□□□ -0.15
LTBR-215ENST00000546296 EGR1P18146 543 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 ATF1P18846 271 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 PRKACBP22694 351 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 CFHR2P36980 270 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 SOX2P48431 317 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 MICBQ29980 383 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 DMKNQ6E0U4 476 aaPredicted RBP14.09□□□□□ -0.15
LTBR-215ENST00000546296 UTS2BQ765I0 119 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 SERPINA12Q8IW75 414 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 OR5D14Q8NGL3 314 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 OR51F2Q8NH61 342 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 AQP3Q92482 292 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 BORCS8Q96FH0 119 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 NEK6Q9HC98 313 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 DNAJB11Q9UBS4 358 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 KCNS2Q9ULS6 477 aa14.09□□□□□ -0.15
LTBR-215ENST00000546296 CSPG4Q6UVK1 2322 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 J3QT63 122 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 RHBDL1O75783 438 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 GYPAP02724 150 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 MT-ND2P03891 347 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 CD2P06729 351 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 MSMBP08118 114 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 ATP1B3P54709 279 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 MED22Q15528 200 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 DCDC5Q6ZRR9 648 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 NLRC3Q7RTR2 1065 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 GLCCI1Q86VQ1 547 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 ANGPTL5Q86XS5 388 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 RPS4Y2Q8TD47 263 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 ZCCHC4Q9H5U6 513 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 POLDIP2Q9Y2S7 368 aa14.08□□□□□ -0.16
LTBR-215ENST00000546296 SRRM5B3KS81 715 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 NDUFA2O43678 99 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 PLPP2O43688 288 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 WNT2P09544 360 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 MUC1P15941 1255 aaPredicted RBP14.07□□□□□ -0.16
LTBR-215ENST00000546296 CELP19835 753 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 GLRA1P23415 457 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 CPT2P23786 658 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 AZGP1P25311 298 aaKnown RBP14.07□□□□□ -0.16
LTBR-215ENST00000546296 RBP2P50120 134 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 MTCP1P56278 107 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 LCN2P80188 198 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 SPHARQ15513 63 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 ESCO2Q56NI9 601 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 TEX36Q5VZQ5 186 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 PRSS48Q7RTY5 328 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 DNAAF1Q8NEP3 725 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 OR8B3Q8NGG8 313 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 OR13C9Q8NGT0 318 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 RGP1Q92546 391 aaPredicted RBP14.07□□□□□ -0.16
LTBR-215ENST00000546296 NEIL1Q96FI4 390 aaPredicted RBP14.07□□□□□ -0.16
LTBR-215ENST00000546296 OR8B2Q96RD0 313 aa14.07□□□□□ -0.16
LTBR-215ENST00000546296 TRAV20A0A0B4J274 112 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 IGKV1-9A0A0C4DH69 117 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 INAFM1C9JVW0 142 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 F5H0A9 414 aaPredicted RBP14.06□□□□□ -0.16
LTBR-215ENST00000546296 ADAM20O43506 726 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 SYNGR1O43759 233 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 FOXH1O75593 365 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 PLATP00750 562 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 DVL1P1P54792 670 aaPredicted RBP14.06□□□□□ -0.16
LTBR-215ENST00000546296 BDH1Q02338 343 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 IRF3Q14653 427 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 YIF1BQ5BJH7 314 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 LYPD2Q6UXB3 125 aa14.06□□□□□ -0.16
LTBR-215ENST00000546296 FAM90A1Q86YD7 464 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms