RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 TGOLN2O43493 480 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 EIF1BO60739 113 aaKnown RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CRTAPO75718 401 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 DHRS3O75911 302 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CSN2P05814 226 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 HCKP08631 526 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SFTA3P0C7M3 94 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 PGA4P0DJD7 388 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 PGA3P0DJD8 388 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 PF4V1P10720 104 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 MMP9P14780 707 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 RCC1P18754 421 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CD38P28907 300 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 RPL12P30050 165 aaKnown RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 PTGFRP43088 359 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 GLP1RP43220 463 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 OR1D4P47884 311 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 P2RY1P47900 373 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SNU13P55769 128 aaKnown RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 BIDP55957 195 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 TMEM50BP56557 158 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CD81P60033 236 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SUPT4H1P63272 117 aaKnown RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CSNK2A1P68400 391 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SLC35A1P78382 337 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 HYAL1Q12794 435 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 ODF1Q14990 250 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SRSF7Q16629 238 aaKnown RBP eCLIP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 DNLZQ5SXM8 178 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 C10orf128Q5T292 105 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 AADACL3Q5VUY0 350 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 FAM109BQ6ICB4 259 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 OR52W1Q6IF63 320 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 WDR74Q6RFH5 385 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 COX15Q7KZN9 410 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 ABHD12BQ7Z5M8 362 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 GVQW1Q8N7I0 195 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF321PQ8N8H1 164 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CSNK2A3Q8NEV1 391 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 GJC3Q8NFK1 279 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 OR1J1Q8NGS3 322 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 OR14K1Q8NGZ2 314 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 OR13G1Q8NGZ3 307 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SLC22A8Q8TCC7 542 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 HAS2Q92819 552 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 TCEAL3Q969E4 200 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF524Q96C55 264 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 RRNAD1Q96FB5 475 aaKnown RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 KIRREL1Q96J84 757 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 ARL5BQ96KC2 179 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 GPER1Q99527 375 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 PRRX2Q99811 253 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SYT3Q9BQG1 590 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 SULT4A1Q9BR01 284 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 RPP25Q9BUL9 199 aaKnown RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 ANGPTL4Q9BY76 406 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 CHST5Q9GZS9 411 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 RGCCQ9H4X1 137 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 C19orf25Q9UFG5 118 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 FBXO9Q9UK97 447 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 B3GALT1Q9Y5Z6 326 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 LHFPL6Q9Y693 200 aa5.68□□□□□ -1.5
SNHG1-225ENST00000545920 COL5A1P20908 1838 aaPredicted RBP5.68□□□□□ -1.5
SNHG1-225ENST00000545920 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 MEX3AA1L020 520 aaKnown RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 AQP7P3A6NL99 342 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF726A6NNF4 738 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 COLCA2A8K830 154 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 VSTM5A8MXK1 200 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 FAM157AC9JC47 383 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 H7C1Q1 480 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 TRAF3IP2O43734 574 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 GPR137BO60478 399 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 LRP3O75074 770 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 NDUFS6O75380 124 aaKnown RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 MED6O75586 246 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 TSPAN15O95858 294 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 CRYBA1P05813 215 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 S100A6P06703 90 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 DANCRP0C864 163 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 MYOGP15173 224 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 MUC1P15941 1255 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 PNLIPP16233 465 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF708P17019 499 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 AGAP20933 346 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 MSR1P21757 451 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 S100PP25815 95 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 OTX1P32242 354 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 KCNJ3P48549 501 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 NPY4RP50391 375 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 P2RY4P51582 365 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 AKR1D1P51857 326 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ZNF121P58317 390 aaPredicted RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 HIST1H3AP68431 136 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 ACY1Q03154 408 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 C1orf61Q13536 156 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 RAB32Q13637 225 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 RBM39Q14498 530 aaKnown RBP5.67□□□□□ -1.5
SNHG1-225ENST00000545920 KCNAB1Q14722 419 aa5.67□□□□□ -1.5
SNHG1-225ENST00000545920 CNN3Q15417 329 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms