RNA–Protein interactions for RNA: ENST00000544432.5

VAMP1-208, Transcript of vesicle associated membrane protein 1, human

TSL 3

Gene VAMP1, Length 759 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAMP1-208	ENST00000544432	GTF2A1L	Q9UNN4	478 aa		11.51	□□□□□ -0.57
VAMP1-208	ENST00000544432	SLC22A13	Q9Y226	551 aa		11.51	□□□□□ -0.57
VAMP1-208	ENST00000544432	KPTN	Q9Y664	436 aa		11.51	□□□□□ -0.57
VAMP1-208	ENST00000544432	TRAV40	A0A0B4J280	105 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	NKX6-3	A6NJ46	265 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	SNTN	A6NMZ2	147 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	SIGLEC5	O15389	551 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	NOS1AP	O75052	506 aa	Predicted RBP	11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ENTPD6	O75354	484 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	RHBDL1	O75783	438 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	RPP14	O95059	124 aa	Known RBP	11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ACAA1	P09110	424 aa	Predicted RBP	11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	GLRA1	P23415	457 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ACTG1	P63261	375 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ACTC1	P68032	377 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ACTA1	P68133	377 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ELF3	P78545	371 aa	Predicted RBP	11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ZNF85	Q03923	595 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	BAMBI	Q13145	260 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	METTL11B	Q5VVY1	283 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	PLCXD3	Q63HM9	321 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	C12orf54	Q6X4T0	127 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ZNF573	Q86YE8	665 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	EGFL6	Q8IUX8	553 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	FAM216B	Q8N7L0	139 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	OR5T2	Q8NGG2	359 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	ST8SIA4	Q92187	359 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	RORB	Q92753	470 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	GCDH	Q92947	438 aa	Predicted RBP	11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	PCGF1	Q9BSM1	259 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	PCDHGB1	Q9Y5G3	927 aa		11.5	□□□□□ -0.57
VAMP1-208	ENST00000544432	IGHV3OR16-10	A0A075B7F0	116 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432		A0A1B0GVI7	797 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432		A0A1B0GW55	424 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	PQLC2L	A1A4F0	135 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DNAJC9-AS1	A6NH13	148 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	OR2AT4	A6NND4	320 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	MPZL2	O60487	215 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	APOL3	O95236	402 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4L2	P0CJ85	424 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4L3	P0CJ86	424 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4L4	P0CJ87	422 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4L5	P0CJ88	424 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4L6	P0CJ89	424 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4L7	P0CJ90	424 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	CAV3	P56539	151 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	ARF6	P62330	175 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	IL13RA1	P78552	427 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	ZIK1	Q3SY52	487 aa	Predicted RBP	11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	CDON	Q4KMG0	1287 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	FDX2	Q6P4F2	183 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	HAGHL	Q6PII5	290 aa	Predicted RBP	11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4L9	Q6RFH8	374 aa	Predicted RBP	11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	PQLC1	Q8N2U9	271 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	KIR3DL3	Q8N743	410 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	POC1A	Q8NBT0	407 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	TMIGD2	Q96BF3	282 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	C10orf35	Q96D05	121 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	C1orf147	Q96MC9	270 aa	Predicted RBP	11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	GAFA1	Q96PS6	74 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	MBOAT4	Q96T53	435 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	MYCBP	Q99417	103 aa	Predicted RBP	11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DCTN5	Q9BTE1	182 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	NOX4	Q9NPH5	578 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	SNTG1	Q9NSN8	517 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	DUX4	Q9UBX2	424 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	ZNF222	Q9UK12	451 aa		11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	EXOG	Q9Y2C4	368 aa	Known RBP	11.49	□□□□□ -0.57
VAMP1-208	ENST00000544432	CENPVL3	A0A0U1RRI6	287 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432		J3QT63	122 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	SYT7	O43581	403 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	SFTPB	P07988	381 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	RNASE1	P07998	156 aa	Known RBP	11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	PGA5	P0DJD9	388 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	PSG2	P11465	335 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	GABRB1	P18505	474 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	MPZ	P25189	248 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	GMFB	P60983	142 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	IKZF1	Q13422	519 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	SLC9A3R2	Q15599	337 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	DGUOK	Q16854	277 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	ZBTB49	Q6ZSB9	765 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	C1orf122	Q6ZSJ8	110 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	FAM220A	Q7Z4H9	259 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	RHOXF1	Q8NHV9	184 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	RNF166	Q96A37	237 aa	Predicted RBP	11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	SLC25A28	Q96A46	364 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	RNFT2	Q96EX2	444 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	SDSL	Q96GA7	329 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432		Q96MT0	163 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	SLC29A1	Q99808	456 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	ADI1	Q9BV57	179 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	PKIB	Q9C010	78 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	GPR173	Q9NS66	373 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	POLDIP2	Q9Y2S7	368 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	GMPPB	Q9Y5P6	360 aa		11.48	□□□□□ -0.57
VAMP1-208	ENST00000544432	IGKV1D-17	A0A075B6S4	117 aa		11.47	□□□□□ -0.57
VAMP1-208	ENST00000544432	IGHV1-69D	A0A0B4J2H0	117 aa		11.47	□□□□□ -0.57
VAMP1-208	ENST00000544432	ANKRD61	A6NGH8	418 aa		11.47	□□□□□ -0.57
VAMP1-208	ENST00000544432	SLC16A6	O15403	523 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms