RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 OR5AK2Q8NH90 309 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 LRRC29Q8WV35 223 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 GATAD2BQ8WXI9 593 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 AQP3Q92482 292 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 SGCDQ92629 289 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 CDCA4Q9BXL8 241 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 UBAP1Q9NZ09 502 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 C2CD3Q4AC94 2353 aa15.98■□□□□ 0.15
DDX55-211ENST00000544429 IGKV1-9A0A0C4DH69 117 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 TRBV2A0A0J9YWF9 115 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 hCG_1807616A0A1W2PRN6 198 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 KIAA1324LA8MWY0 1029 aaPredicted RBP15.97■□□□□ 0.15
DDX55-211ENST00000544429 PLPP2O43688 288 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 RHBDL1O75783 438 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 CRHBPP24387 322 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 MPZP25189 248 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 CD80P33681 288 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 SEC61A1P61619 476 aaKnown RBP15.97■□□□□ 0.15
DDX55-211ENST00000544429 IRF3Q14653 427 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 ZNF841Q6ZN19 808 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 KCTD8Q6ZWB6 473 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 FAM90A1Q86YD7 464 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 STX19Q8N4C7 294 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 OR51F2Q8NH61 342 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 TMEM186Q96B77 213 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 FGGYQ96C11 551 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 SMIM19Q96E16 107 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 ZNF184Q99676 751 aaPredicted RBP15.97■□□□□ 0.15
DDX55-211ENST00000544429 TRIM36Q9NQ86 728 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 CHCHD3Q9NX63 227 aaKnown RBP15.97■□□□□ 0.15
DDX55-211ENST00000544429 ERVK-18Q9QC07 812 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 MIOXQ9UGB7 285 aa15.97■□□□□ 0.15
DDX55-211ENST00000544429 IGKV1-27A0A075B6S5 117 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 TRAV38-1A0A0B4J264 116 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 TRAV20A0A0B4J274 112 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 PPIAL4CA0A0B4J2A2 164 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 C3orf80F5H4A9 247 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 RRP9O43818 475 aaKnown RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 GATBO75879 557 aaKnown RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 ACAA1P09110 424 aaPredicted RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 MUC1P15941 1255 aaPredicted RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 HOXB4P17483 251 aaPredicted RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 ZFP36P26651 326 aaKnown RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 SFRP4Q6FHJ7 346 aaPredicted RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 LYPD2Q6UXB3 125 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 ZNF573Q86YE8 665 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 PARP16Q8N5Y8 322 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 DNAAF1Q8NEP3 725 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 C12orf43Q96C57 262 aaKnown RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 COMMD4Q9H0A8 199 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 SCN3BQ9NY72 215 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 KCNS2Q9ULS6 477 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 PCDHB10Q9UN67 800 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 LRCH1Q9Y2L9 728 aa15.96■□□□□ 0.15
DDX55-211ENST00000544429 LSM2Q9Y333 95 aaKnown RBP15.96■□□□□ 0.15
DDX55-211ENST00000544429 PTGES3LE9PB15 166 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 J3QT63 122 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 DENRO43583 198 aaKnown RBP15.95■□□□□ 0.14
DDX55-211ENST00000544429 NDUFA2O43678 99 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 NOS1APO75052 506 aaPredicted RBP15.95■□□□□ 0.14
DDX55-211ENST00000544429 ALX3O95076 343 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 MT-ND2P03891 347 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 WNT4P56705 351 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 PAX2Q02962 417 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 ACSM1Q08AH1 577 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 KCNJ8Q15842 424 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 ZNF529Q6P280 563 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 HAGHLQ6PII5 290 aaPredicted RBP15.95■□□□□ 0.14
DDX55-211ENST00000544429 GLCCI1Q86VQ1 547 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 CALHM1Q8IU99 346 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 DEFB108BQ8NET1 73 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 OR13C3Q8NGS6 347 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 MYDGFQ969H8 173 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 DACT3Q96B18 629 aaPredicted RBP15.95■□□□□ 0.14
DDX55-211ENST00000544429 NEIL1Q96FI4 390 aaPredicted RBP15.95■□□□□ 0.14
DDX55-211ENST00000544429 PGLYRP3Q96LB9 341 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 CNBD2Q96M20 576 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 WDR13Q9H1Z4 485 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 HIF1ANQ9NWT6 349 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 KAAG1Q9UBP8 84 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 CTSZQ9UBR2 303 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 TPRKBQ9Y3C4 175 aa15.95■□□□□ 0.14
DDX55-211ENST00000544429 CRLF1O75462 422 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 FOXH1O75593 365 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 FCN3O75636 299 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 SERPINA3P01011 423 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 CD1AP06126 327 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 PGA5P0DJD9 388 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 RPS2P15880 293 aaKnown RBP15.94■□□□□ 0.14
DDX55-211ENST00000544429 AMY2BP19961 511 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 HAAOP46952 286 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 FUT6P51993 359 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 RPS11P62280 158 aaKnown RBP eCLIP15.94■□□□□ 0.14
DDX55-211ENST00000544429 ATPAF1Q5TC12 328 aaPredicted RBP15.94■□□□□ 0.14
DDX55-211ENST00000544429 STUMQ69YW2 141 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 ASPHD2Q6ICH7 369 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 CRIP3Q6Q6R5 217 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 BOLLQ8N9W6 283 aaKnown RBP15.94■□□□□ 0.14
DDX55-211ENST00000544429 POC1AQ8NBT0 407 aa15.94■□□□□ 0.14
DDX55-211ENST00000544429 SEH1LQ96EE3 360 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms