RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 OR8B4Q96RC9 309 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 MBOAT4Q96T53 435 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 SLC6A13Q9NSD5 602 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 ONECUT1Q9UBC0 465 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 FZR1Q9UM11 496 aa6.15□□□□□ -1.42
SRGAP1-206ENST00000543397 ALOX5APP20292 161 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 BLOC1S1P78537 153 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 PSG6Q00889 435 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 TPBGQ13641 420 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 TGIF1Q15583 401 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF774Q6NX45 483 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 OSR2Q8N2R0 312 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 OR13F1Q8NGS4 319 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 SMAP2Q8WU79 429 aaPredicted RBP6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 BTF3L4Q96K17 158 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 SIRT7Q9NRC8 400 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM74BQ9NUR3 256 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 ERRFI1Q9UJM3 462 aaPredicted RBP6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 TRAPPC4Q9Y296 219 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 A6NNC1 897 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 RER1O15258 196 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 EPHA2P29317 976 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 RAP2BP61225 183 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 CDC20Q12834 499 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 VAMP3Q15836 100 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 SSX7Q7RTT5 188 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 LACC1Q8IV20 430 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 FAM58AQ8N1B3 248 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 SUMF1Q8NBK3 374 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM171Q8WVE6 324 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 TM4SF19Q96DZ7 209 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF251Q9BRH9 671 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 SF3B5Q9BWJ5 86 aaKnown RBP6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 SRRQ9GZT4 340 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 PLCXD1Q9NUJ7 323 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 ASF1BQ9NVP2 202 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 LRP12Q9Y561 859 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 A3GALT2U3KPV4 340 aa6.15□□□□□ -1.43
SRGAP1-206ENST00000543397 TCRBV5S2A0A599 114 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TMEM235A6NFC5 223 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 C16orf97H3BN30 126 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 AIPO00170 330 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 FOXS1O43638 330 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 OR8U8P0C7N1 319 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 FGF5P12034 268 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 MGMTP16455 207 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 NHLH1Q02575 133 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TLE1Q04724 770 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TATDN3Q17R31 274 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SOWAHCQ53LP3 525 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 FAHD1Q6P587 224 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CALHM3Q86XJ0 350 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 NPEPL1Q8NDH3 523 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 PTPMT1Q8WUK0 201 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 PTP4A1Q93096 173 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SLC35E1Q96K37 410 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 WDFY2Q96P53 400 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SLX1AQ9BQ83 275 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CDCA4Q9BXL8 241 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 INTS1Q8N201 2190 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TET1Q8NFU7 2136 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TDRD15B5MCY1 1934 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CRYM-AS1A6NIL9 109 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 AGPAT2O15120 278 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 ADAM20O43506 726 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 GREM1O60565 184 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 APOC3P02656 99 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CA6P23280 308 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SLC25A1P53007 311 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 EIF4EBP2Q13542 120 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 CTU2Q2VPK5 515 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 DMRTC1Q5HYR2 192 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 OR2B11Q5JQS5 317 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 ZNF441Q8N8Z8 693 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 DLL4Q9NR61 685 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TAS2R5Q9NYW4 299 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TAAR3PQ9P1P4 343 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 COPS3Q9UNS2 423 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 A0A1B0GTH9 108 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 MEIOCA2RUB1 952 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 ZFP36L2P47974 494 aaKnown RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 THBS3P49746 956 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 PPP1CBP62140 327 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 GK2Q14410 553 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 BTNL3Q6UXE8 466 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 GALMQ96C23 342 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SEC22AQ96IW7 307 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SNX22Q96L94 193 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 BIN3Q9NQY0 253 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 C20orf141Q9NUB4 165 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 COL11A1P12107 1806 aaPredicted RBP6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 AQP7P3A6NL99 342 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 SERPINE3A8MV23 424 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 TFAP2AP05549 437 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 ATF1P18846 271 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 GABRA4P48169 554 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 BVESQ8NE79 360 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 OR52M1Q8NGK5 317 aa6.14□□□□□ -1.43
SRGAP1-206ENST00000543397 FBXW5Q969U6 566 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms