RNA–Protein interactions for RNA: ENST00000543324.1

CIT-213, Transcript of citron rho-interacting serine/threonine kinase, human

TSL 3

Gene CIT, Length 497 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIT-213	ENST00000543324	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	5.49	□□□□□ -1.53
CIT-213	ENST00000543324	COA4	Q9NYJ1	87 aa		5.49	□□□□□ -1.53
CIT-213	ENST00000543324	TVP23B	Q9NYZ1	205 aa		5.49	□□□□□ -1.53
CIT-213	ENST00000543324	PIPOX	Q9P0Z9	390 aa		5.49	□□□□□ -1.53
CIT-213	ENST00000543324	RPS6KB2	Q9UBS0	482 aa		5.49	□□□□□ -1.53
CIT-213	ENST00000543324	A4GNT	Q9UNA3	340 aa		5.49	□□□□□ -1.53
CIT-213	ENST00000543324	TMEM5	Q9Y2B1	443 aa		5.49	□□□□□ -1.53
CIT-213	ENST00000543324	TRAV1-2	A0A0B4J238	106 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	C5orf58	C9J3I9	102 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324		F8W036	122 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	NDUFS8	O00217	210 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	PLPP3	O14495	311 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	PDCD5	O14737	125 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	TIMM23	O14925	209 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SSNA1	O43805	119 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	NCR1	O76036	304 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SNAPIN	O95295	136 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SOX14	O95416	240 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	MT-ATP6	P00846	226 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	LPL	P06858	475 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	CELA3B	P08861	270 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ASAH2B	P0C7U1	165 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	APEH	P13798	732 aa	Known RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF43	P17038	809 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	GIF	P27352	417 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	HTR1F	P30939	366 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	IFNGR2	P38484	337 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	MNDA	P41218	407 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	RAB13	P51153	203 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	FABP6	P51161	128 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF133	P52736	654 aa	Predicted RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	RGS8	P57771	180 aa	Predicted RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	TAS2R43	P59537	309 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ARF1	P84077	181 aa	Known RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ZP4	Q12836	540 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	TSPAN31	Q12999	210 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	GK2	Q14410	553 aa	Predicted RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	HLX	Q14774	488 aa	Predicted RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	OR1Q1	Q15612	314 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF74	Q16587	644 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	HIST3H3	Q16695	136 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	MSMP	Q1L6U9	139 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	CEACAM16	Q2WEN9	425 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SFXN4	Q6P4A7	337 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SMARCD3	Q6STE5	483 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF322	Q6U7Q0	402 aa	Predicted RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	UQCC3	Q6UW78	93 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	GLDN	Q6ZMI3	551 aa	Predicted RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	RASSF6	Q6ZTQ3	369 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	PGAP1	Q75T13	922 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	PXK	Q7Z7A4	578 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ZER1	Q7Z7L7	766 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	CDH26	Q8IXH8	852 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	PDZD9	Q8IXQ8	264 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	CCDC36	Q8IYA8	594 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	DMBX1	Q8NFW5	382 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	OR4F15	Q8NGB8	312 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	OR6T1	Q8NGN1	323 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	OR1S1	Q8NH92	325 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	MOSPD2	Q8NHP6	518 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	TEX47	Q8TBZ9	253 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	GATAD1	Q8WUU5	269 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SMIM4	Q8WVI0	70 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	LIPH	Q8WWY8	451 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	FAM168A	Q92567	244 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	GTF3A	Q92664	365 aa	Known RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SLC25A36	Q96CQ1	311 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	MRPS24	Q96EL2	167 aa	Known RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ELMOD3	Q96FG2	381 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ABHD1	Q96SE0	405 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF607	Q96SK3	696 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	DDO	Q99489	341 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	PRSS27	Q9BQR3	290 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	SOX7	Q9BT81	388 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	CRLF2	Q9HC73	371 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	MYOZ1	Q9NP98	299 aa	Predicted RBP	5.48	□□□□□ -1.53
CIT-213	ENST00000543324	MGAT4C	Q9UBM8	478 aa		5.48	□□□□□ -1.53
CIT-213	ENST00000543324	PLEC	Q15149	4684 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324		A0A096LPE4	126 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324		A0A1W2PPZ6	126 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	NPIPB13	A6NJU9	1138 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324		B9A039	149 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	NPIPB4	C9JG80	1138 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324		M0R3H8	397 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	PLPP2	O43688	288 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF254	O75437	659 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	LY6H	O94772	140 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TSPAN15	O95858	294 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	CRYAA	P02489	173 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	TF	P02787	698 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	HPX	P02790	462 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	HIST1H2AB	P04908	130 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	CD1A	P06126	327 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	S100A6	P06703	90 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	UBB	P0CG47	229 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	UBC	P0CG48	685 aa	Known RBP	5.47	□□□□□ -1.53
CIT-213	ENST00000543324	PGA4	P0DJD7	388 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	PGA3	P0DJD8	388 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	ZNF35	P13682	527 aa		5.47	□□□□□ -1.53
CIT-213	ENST00000543324	CEL	P19835	753 aa		5.47	□□□□□ -1.53

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms