RNA–Protein interactions for RNA: ENST00000542460.5

LIG1-204, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-204ENST00000542460 C11orf53Q8IXP5 236 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 SCCPDHQ8NBX0 429 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 OR11L1Q8NGX0 322 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 ZNF420Q8TAQ5 688 aaPredicted RBP14.46□□□□□ -0.1
LIG1-204ENST00000542460 HPS1Q92902 700 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 TMEM138Q9NPI0 162 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 TMEM106BQ9NUM4 274 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 C1orf123Q9NWV4 160 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 STUB1Q9UNE7 303 aa14.46□□□□□ -0.1
LIG1-204ENST00000542460 TRAV8-7A0A075B6U6 113 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 CDIPTO14735 213 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 HCKP08631 526 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 PMELP40967 661 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 HAAOP46952 286 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 ART1P52961 327 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 MTCP1P56278 107 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 TMEM33P57088 247 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 CARTPTQ16568 116 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 HSD17B12Q53GQ0 312 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 Q5PR19 223 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 FAM27D1Q5T7N8 215 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 SHEQ5VZ18 495 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 CLEC2AQ6UVW9 174 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 TGIF2LYQ8IUE0 185 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 OR51A2Q8NGJ7 313 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 RPL3LQ92901 407 aaKnown RBP14.45□□□□□ -0.1
LIG1-204ENST00000542460 TCF7L1Q9HCS4 588 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 ITGB1BP2Q9UKP3 347 aa14.45□□□□□ -0.1
LIG1-204ENST00000542460 IGKV1-27A0A075B6S5 117 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 NDUFS8O00217 210 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 ALDOBP05062 364 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 TFAP2AP05549 437 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 IRF2P14316 349 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 SRMP19623 302 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 BDKRB2P30411 391 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 CLEC12BQ2HXU8 276 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 HAGHLQ6PII5 290 aaPredicted RBP14.44□□□□□ -0.1
LIG1-204ENST00000542460 DNM1P46Q6ZS02 220 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 ZNF826PQ6ZT77 177 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 FAM168AQ92567 244 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 CPNE2Q96FN4 548 aaPredicted RBP14.44□□□□□ -0.1
LIG1-204ENST00000542460 PPIL3Q9H2H8 161 aaKnown RBP14.44□□□□□ -0.1
LIG1-204ENST00000542460 RNF7Q9UBF6 113 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 SCOCQ9UIL1 159 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 SSR3Q9UNL2 185 aa14.44□□□□□ -0.1
LIG1-204ENST00000542460 hCG_1807616A0A1W2PRN6 198 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 TRIM64BA6NI03 449 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 GIFP27352 417 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 FGF9P31371 208 aaPredicted RBP14.43□□□□□ -0.1
LIG1-204ENST00000542460 CFHR2P36980 270 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 RIN1Q13671 783 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 KISS1Q15726 138 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 WDR82Q6UXN9 313 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 C1orf87Q8N0U7 546 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 OR13F1Q8NGS4 319 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 ZNF671Q8TAW3 534 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 AQP3Q92482 292 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 YIPF6Q96EC8 236 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 SLITRK2Q9H156 845 aa14.43□□□□□ -0.1
LIG1-204ENST00000542460 MEGF11A6BM72 1044 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 CLDN25C9JDP6 229 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 TMEM178BH3BS89 294 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 J3QT63 122 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 MAS1P04201 325 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 MPZP25189 248 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 CALRP27797 417 aaKnown RBP14.42□□□□□ -0.1
LIG1-204ENST00000542460 ALDH3B2P48448 385 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 TIMM50Q3ZCQ8 353 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 PEG10Q86TG7 708 aaKnown RBP14.42□□□□□ -0.1
LIG1-204ENST00000542460 ANGPTL5Q86XS5 388 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 CALHM1Q8IU99 346 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 OR52N4Q8NGI2 321 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 OR10Z1Q8NGY1 313 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 C10orf105Q8TEF2 133 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 SPACA5Q96QH8 159 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 PKIBQ9C010 78 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 OR51E2Q9H255 320 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 EXOSC4Q9NPD3 245 aaKnown RBP14.42□□□□□ -0.1
LIG1-204ENST00000542460 DCAF16Q9NXF7 216 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 POLDIP2Q9Y2S7 368 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 ARID1AO14497 2285 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 CELSR1Q9NYQ6 3014 aa14.42□□□□□ -0.1
LIG1-204ENST00000542460 PPIHO43447 177 aaKnown RBP14.41□□□□□ -0.1
LIG1-204ENST00000542460 CYB5R3P00387 301 aaPredicted RBP14.41□□□□□ -0.1
LIG1-204ENST00000542460 LHBP01229 141 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 GADD45AP24522 165 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 IL24Q13007 206 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 DDI2Q5TDH0 399 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 C22orf42Q6IC83 251 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 GDPGP1Q6ZNW5 385 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 SATL1Q86VE3 508 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 KRTAP1-3Q8IUG1 177 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 CDH26Q8IXH8 852 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 RAB1CQ92928 201 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 TMIGD2Q96BF3 282 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 TIMD4Q96H15 378 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 GPER1Q99527 375 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 CHCHD6Q9BRQ6 235 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 PIMREGQ9BSJ6 248 aa14.41□□□□□ -0.1
LIG1-204ENST00000542460 SNTG1Q9NSN8 517 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms