RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 SLC22A18ASQ8N1D0 253 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 IL1F10Q8WWZ1 152 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 SPTSSAQ969W0 71 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 VWCEQ96DN2 955 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 GPR132Q9UNW8 380 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 NSG2Q9Y328 171 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 HS3ST3A1Q9Y663 406 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 SMIM6P0DI80 62 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 IDH3GP51553 393 aaPredicted RBP11.47□□□□□ -0.57
MSH6-210ENST00000540021 MECP2P51608 486 aaKnown RBP11.47□□□□□ -0.57
MSH6-210ENST00000540021 HNRNPKP61978 463 aaKnown RBP eCLIP11.47□□□□□ -0.57
MSH6-210ENST00000540021 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.47□□□□□ -0.57
MSH6-210ENST00000540021 CCDC71LQ8N9Z2 235 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 SPSB2Q99619 263 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 RNF126Q9BV68 326 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 VN1R1Q9GZP7 353 aa11.47□□□□□ -0.57
MSH6-210ENST00000540021 FOLR1P15328 257 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 SPINK2P20155 84 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 P2RY4P51582 365 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 PPP1R3BQ86XI6 285 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 GPR137CQ8N3F9 429 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 SGCZQ96LD1 299 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 G6PC2Q9NQR9 355 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 ZNF727A8MUV8 499 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 RNF4P78317 190 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 TEX30Q5JUR7 227 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 ZNF813Q6ZN06 617 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 RNF144BQ7Z419 303 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 OR14L1PQ8NHC6 308 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 ASB10Q8WXI3 467 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 HIST1H2BAQ96A08 127 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 CPNE4Q96A23 557 aaPredicted RBP11.46□□□□□ -0.57
MSH6-210ENST00000540021 SLC26A1Q9H2B4 701 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 OR51B6Q9H340 312 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 NECAP2Q9NVZ3 263 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 GNG13Q9P2W3 67 aa11.46□□□□□ -0.57
MSH6-210ENST00000540021 SVILO95425 2214 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 MFNGO00587 321 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 NR2C1P13056 603 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 APOBEC1P41238 236 aaKnown RBP11.46□□□□□ -0.58
MSH6-210ENST00000540021 MMP16P51512 607 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 SLC35A1P78382 337 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 MALLQ13021 153 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 C1orf100Q5SVJ3 147 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 THEM4Q5T1C6 240 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 PLCXD3Q63HM9 321 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 BEND4Q6ZU67 534 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 LYZL2Q7Z4W2 148 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 LGI3Q8N145 548 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 ARHGEF39Q8N4T4 335 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 OR5L2Q8NGL0 311 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 RNF133Q8WVZ7 376 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 ZNF286AQ9HBT8 521 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 KCNS2Q9ULS6 477 aa11.46□□□□□ -0.58
MSH6-210ENST00000540021 AP4M1O00189 453 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 FSTP19883 344 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 FCARP24071 287 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 NAAAQ02083 359 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 NHLH2Q02577 135 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 ZNF239Q16600 458 aaKnown RBP11.45□□□□□ -0.58
MSH6-210ENST00000540021 MISPQ8IVT2 679 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 OR1N1Q8NGS0 311 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 WBP1Q96G27 269 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 PAPOLGQ9BWT3 736 aaKnown RBP11.45□□□□□ -0.58
MSH6-210ENST00000540021 PLEKHA2Q9HB19 425 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 GAR1Q9NY12 217 aaKnown RBP11.45□□□□□ -0.58
MSH6-210ENST00000540021 COL4A3Q01955 1670 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 OR5H15A6NDH6 313 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 LINC01387J3KSC0 135 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 IGHV3-9P01782 118 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 C5orf46Q6UWT4 87 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 LCN15Q6UWW0 184 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 NECAP1Q8NC96 275 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 HIST1H2AAQ96QV6 131 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 OCSTAMPQ9BR26 566 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 ADAM19Q9H013 955 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 GSN-AS1Q9NRJ2 163 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 DNAJB11Q9UBS4 358 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 A0A087WZY1 265 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 MSTNO14793 375 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 NDUFA2O43678 99 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 NKX2-1P43699 371 aaPredicted RBP11.45□□□□□ -0.58
MSH6-210ENST00000540021 MRPS21P82921 87 aaKnown RBP11.45□□□□□ -0.58
MSH6-210ENST00000540021 PLAC9Q5JTB6 97 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 SLC35B3Q9H1N7 401 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 THSD7BQ9C0I4 1608 aa11.45□□□□□ -0.58
MSH6-210ENST00000540021 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 FIGNL2A6NMB9 653 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 TSTD3H0UI37 97 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 M0R135 149 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 OR2J2O76002 312 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 DXOO77932 396 aaKnown RBP11.44□□□□□ -0.58
MSH6-210ENST00000540021 HLA-HP01893 362 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 DUSP1P28562 367 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 DEGS2Q6QHC5 323 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 APCDD1LQ8NCL9 501 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 ADAMTS17Q8TE56 1095 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 ZNF524Q96C55 264 aa11.44□□□□□ -0.58
MSH6-210ENST00000540021 ZNF799Q96GE5 643 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms