RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 SLC25A43Q8WUT9 341 aaPredicted RBP17.81■□□□□ 0.44
TMEM260-203ENST00000539559 KLRF1Q9NZS2 232 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 C14orf166Q9Y224 244 aaKnown RBP17.81■□□□□ 0.44
TMEM260-203ENST00000539559 SPAG17Q6Q759 2223 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 TRAV20A0A0B4J274 112 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 DIRAS3O95661 229 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 PGA4P0DJD7 388 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 PGA3P0DJD8 388 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 FAHP16930 419 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 APOBEC1P41238 236 aaKnown RBP17.81■□□□□ 0.44
TMEM260-203ENST00000539559 HNRNPKP61978 463 aaKnown RBP eCLIP17.81■□□□□ 0.44
TMEM260-203ENST00000539559 C17orf67Q0P5P2 114 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 TSPO2Q5TGU0 170 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 EIF5AL1Q6IS14 154 aaKnown RBP17.81■□□□□ 0.44
TMEM260-203ENST00000539559 NAXEQ8NCW5 288 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 ST8SIA1Q92185 356 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 LYZL4Q96KX0 146 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 RAB33BQ9H082 229 aa17.81■□□□□ 0.44
TMEM260-203ENST00000539559 PNRC2Q9NPJ4 139 aaKnown RBP17.81■□□□□ 0.44
TMEM260-203ENST00000539559 C5orf52A6NGY3 159 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 F5H5K5 113 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 FABP1P07148 127 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 ASCL1P50553 236 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 RRADP55042 308 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 FABP9Q0Z7S8 132 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 GGNBP1Q5YKI7 109 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 C5orf46Q6UWT4 87 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 FNDC9Q8TBE3 224 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 SCGB3A2Q96PL1 93 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 OR5B2Q96R09 309 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 LIME1Q9H400 295 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 RNF122Q9H9V4 155 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 SPACA1Q9HBV2 294 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 ALKBH4Q9NXW9 302 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 C7orf77A4D0Y5 90 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 TSPAN15O95858 294 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 QDPRP09417 244 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 NXPH1P58417 271 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 OR2B8PP59922 312 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 THEM4Q5T1C6 240 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 NOXO1Q8NFA2 376 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 EMG1Q92979 244 aaKnown RBP17.8■□□□□ 0.44
TMEM260-203ENST00000539559 REEP6Q96HR9 211 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 PRRX2Q99811 253 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 PARP11Q9NR21 331 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 KLHL13Q9P2N7 655 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 TIMM10BQ9Y5J6 103 aa17.8■□□□□ 0.44
TMEM260-203ENST00000539559 MSTNO14793 375 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 TXNL1O43396 289 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 FCGR2AP12318 317 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 UBE2V2Q15819 145 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 APCDD1LQ8NCL9 501 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 OR9K2Q8NGE7 335 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 OR14K1Q8NGZ2 314 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 TOMM40LQ969M1 308 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 EIF5A2Q9GZV4 153 aaKnown RBP17.79■□□□□ 0.44
TMEM260-203ENST00000539559 GSN-AS1Q9NRJ2 163 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 MEMO1Q9Y316 297 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 RFNGQ9Y644 331 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 LMO7DNF2Z398 122 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 DEDDO75618 318 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 HOXB1P14653 301 aaPredicted RBP17.79■□□□□ 0.44
TMEM260-203ENST00000539559 S100A12P80511 92 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 BRICD5Q6PL45 260 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 C15orf54Q8N8G6 183 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 DYRK2Q92630 601 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 SH3BGRL3Q9H299 93 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 WFDC1Q9HC57 220 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 C1orf123Q9NWV4 160 aa17.79■□□□□ 0.44
TMEM260-203ENST00000539559 IGHG1P01857 330 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 ZNF14P17017 642 aaPredicted RBP17.78■□□□□ 0.44
TMEM260-203ENST00000539559 OPRM1P35372 400 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 THBS4P35443 961 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 TAS2R46P59540 309 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 SULF2Q8IWU5 870 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 FAM24BQ8N5W8 94 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 POC1BQ8TC44 478 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 CLDN23Q96B33 292 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 PGAM5Q96HS1 289 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 TRBV23-1A0A0A0MS06 115 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 FIGNL2A6NMB9 653 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 TAAR5O14804 337 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 TRAF3IP2O43734 574 aaPredicted RBP17.78■□□□□ 0.44
TMEM260-203ENST00000539559 EIF5AP63241 154 aaKnown RBP17.78■□□□□ 0.44
TMEM260-203ENST00000539559 C17orf82Q86X59 251 aaPredicted RBP17.78■□□□□ 0.44
TMEM260-203ENST00000539559 C20orf196Q8IYI0 205 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 RGCCQ9H4X1 137 aa17.78■□□□□ 0.44
TMEM260-203ENST00000539559 NQO2P16083 231 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 ACKR3P25106 362 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 CSNK1EP49674 416 aaKnown RBP17.77■□□□□ 0.44
TMEM260-203ENST00000539559 C14orf28Q4W4Y0 310 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 IGSF11Q5DX21 431 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 FAM209BQ5JX69 171 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 ADAM5Q6NVV9 412 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 FAM89BQ8N5H3 189 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 PPP4R1LQ9P1A2 415 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 GHRLQ9UBU3 117 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 FBXO7Q9Y3I1 522 aa17.77■□□□□ 0.44
TMEM260-203ENST00000539559 COL5A1P20908 1838 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms