RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 SLC6A7Q99884 636 aa17.62■□□□□ 0.41
DDX55-205ENST00000538744 PAPOLGQ9BWT3 736 aaKnown RBP17.62■□□□□ 0.41
DDX55-205ENST00000538744 PECRQ9BY49 303 aa17.62■□□□□ 0.41
DDX55-205ENST00000538744 SLC2A8Q9NY64 477 aa17.62■□□□□ 0.41
DDX55-205ENST00000538744 ZNF69Q9UC07 566 aa17.62■□□□□ 0.41
DDX55-205ENST00000538744 MEIKINA0A087WXM9 373 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 NGFP01138 241 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 VSIG10L2P0DP72 767 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 KIR2DL2P43627 348 aaPredicted RBP17.61■□□□□ 0.41
DDX55-205ENST00000538744 HLXQ14774 488 aaPredicted RBP17.61■□□□□ 0.41
DDX55-205ENST00000538744 RTL6Q6ICC9 239 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 FTMTQ8N4E7 242 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 OCSTAMPQ9BR26 566 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 IL36GQ9NZH8 169 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 EIF3KQ9UBQ5 218 aaKnown RBP17.61■□□□□ 0.41
DDX55-205ENST00000538744 GPR160Q9UJ42 338 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 SERPINE3A8MV23 424 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 CA11O75493 328 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 CST4P01036 141 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 CSN2P05814 226 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 SPINK2P20155 84 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 WNT5AP41221 380 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 PDZK1IP1Q13113 114 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 PRDX4Q13162 271 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 SF3B4Q15427 424 aaKnown RBP eCLIP17.61■□□□□ 0.411e-13■■■■■ 68.7
DDX55-205ENST00000538744 NKPD1Q17RQ9 610 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 TBC1D28Q2M2D7 210 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 SCGB2B2Q4G0G5 96 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 NSUN5P2Q63ZY6 315 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 RPUSD3Q6P087 351 aaKnown RBP17.61■□□□□ 0.41
DDX55-205ENST00000538744 ZNF585AQ6P3V2 769 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 RBMXL3Q8N7X1 1067 aaKnown RBP17.61■□□□□ 0.41
DDX55-205ENST00000538744 OR5L1Q8NGL2 311 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 ST8SIA4Q92187 359 aa17.61■□□□□ 0.41
DDX55-205ENST00000538744 TMEM82A0PJX8 343 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 SMLR1H3BR10 107 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 FABP7O15540 132 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 LYZL6O75951 148 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 GABRR1P24046 479 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 HRH1P35367 487 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 CXADRP78310 365 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 PPA1Q15181 289 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 GABRA6Q16445 453 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 ACTBL2Q562R1 376 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 SEZ6L2Q6UXD5 910 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 CD163Q86VB7 1156 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 OR4K15Q8NH41 348 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 CCDC107Q8WV48 283 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 SNAPC3Q92966 411 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 ALX4Q9H161 411 aaPredicted RBP17.6■□□□□ 0.41
DDX55-205ENST00000538744 POFUT1Q9H488 388 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 PCDHB16Q9NRJ7 776 aa17.6■□□□□ 0.41
DDX55-205ENST00000538744 UBE2QL1A1L167 161 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 MKRN2OSH3BPM6 223 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 CRYABP02511 175 aaKnown RBP17.59■□□□□ 0.41
DDX55-205ENST00000538744 HOXB1P14653 301 aaPredicted RBP17.59■□□□□ 0.41
DDX55-205ENST00000538744 ZNF14P17017 642 aaPredicted RBP17.59■□□□□ 0.41
DDX55-205ENST00000538744 VWA1Q6PCB0 445 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 ZDHHC23Q8IYP9 409 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 SPICQ8N5J4 248 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 MRPS24Q96EL2 167 aaKnown RBP17.59■□□□□ 0.41
DDX55-205ENST00000538744 WBP1Q96G27 269 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 SSUH2Q9Y2M2 353 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 NPTNQ9Y639 398 aa17.59■□□□□ 0.41
DDX55-205ENST00000538744 URB1O60287 2271 aaKnown RBP17.58■□□□□ 0.41
DDX55-205ENST00000538744 J3QW42 95 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 IFNA6P05013 189 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 COX5AP20674 150 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 MRPL49Q13405 166 aaKnown RBP17.58■□□□□ 0.41
DDX55-205ENST00000538744 CDK10Q15131 360 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 INO80CQ6PI98 192 aaPredicted RBP17.58■□□□□ 0.41
DDX55-205ENST00000538744 ZSCAN4Q8NAM6 433 aaPredicted RBP17.58■□□□□ 0.41
DDX55-205ENST00000538744 C1orf162Q8NEQ5 155 aaPredicted RBP17.58■□□□□ 0.41
DDX55-205ENST00000538744 OR13C8Q8NGS7 320 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 HYLS1Q96M11 299 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 SCNM1Q9BWG6 230 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 ZNF436Q9C0F3 470 aaPredicted RBP17.58■□□□□ 0.41
DDX55-205ENST00000538744 MYOZ1Q9NP98 299 aaPredicted RBP17.58■□□□□ 0.41
DDX55-205ENST00000538744 DKK4Q9UBT3 224 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 LHX6Q9UPM6 363 aa17.58■□□□□ 0.41
DDX55-205ENST00000538744 IGKV1-12A0A0C4DH73 117 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 PQLC2LA1A4F0 135 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 CD300LBA8K4G0 201 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 K7EM74 188 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 IGKV1D-12P01611 117 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 NHLH1Q02575 133 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 CEACAM21Q3KPI0 293 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 RFPL4BQ6ZWI9 263 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 OSR2Q8N2R0 312 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 OR52B4Q8NGK2 314 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 OR51F2Q8NH61 342 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 ZFAND1Q8TCF1 268 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 FBXW5Q969U6 566 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 GPR137Q96N19 417 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 RANBP3Q9H6Z4 567 aaPredicted RBP17.58■□□□□ 0.4
DDX55-205ENST00000538744 PLSCR4Q9NRQ2 329 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 PLEKHJ1Q9NW61 149 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 MGAT4CQ9UBM8 478 aa17.58■□□□□ 0.4
DDX55-205ENST00000538744 AKAP13Q12802 2813 aa17.57■□□□□ 0.4
DDX55-205ENST00000538744 CELSR3Q9NYQ7 3312 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms