RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 DNAJC13O75165 2243 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF407Q9C0G0 2248 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 FIGNL2A6NMB9 653 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 MRPL33O75394 65 aaKnown RBP12.18□□□□□ -0.46
LIMK1-208ENST00000538333 IGHV3-9P01782 118 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 SLC25A4P12235 298 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 AGTR1P30556 359 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF92Q03936 586 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 SRYQ05066 204 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 CNN3Q15417 329 aaKnown RBP12.18□□□□□ -0.46
LIMK1-208ENST00000538333 OR8B8Q15620 311 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 TMEM128Q5BJH2 165 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 TOR2AQ5JU69 321 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 SIGIRRQ6IA17 410 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 PLXDC2Q6UX71 529 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 ASCL4Q6XD76 172 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 LINC00696Q6ZRV3 163 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 C6orf201Q7Z4U5 140 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF546Q86UE3 836 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 COMMD7Q86VX2 200 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 TMEM251Q8N6I4 163 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 OR13G1Q8NGZ3 307 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 CASTOR1Q8WTX7 329 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 SEC22AQ96IW7 307 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 CDC6Q99741 560 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 SLC6A15Q9H2J7 730 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 SLC7A10Q9NS82 523 aa12.18□□□□□ -0.46
LIMK1-208ENST00000538333 MCTS1Q9ULC4 181 aaKnown RBP12.18□□□□□ -0.46
LIMK1-208ENST00000538333 CELSR3Q9NYQ7 3312 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 FAM166BA8MTA8 275 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 ANGPTL7O43827 346 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 TNFSF15O95150 251 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF806P0C7X5 589 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 TMEM225BP0DP42 221 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 EDN3P14138 238 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 PRKACBP22694 351 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 FPR2P25090 351 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 NPY4RP50391 375 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 TAS2R46P59540 309 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 PPA1Q15181 289 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 PABPC1L2AQ5JQF8 200 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 C11orf87Q6NUJ2 197 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 OVCH2Q7RTZ1 564 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 CPEB3Q8NE35 698 aaKnown RBP12.17□□□□□ -0.46
LIMK1-208ENST00000538333 PPP1R1CQ8WVI7 109 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 MAFIPQ8WZ33 124 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 PDCD10Q9BUL8 212 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 METTL9Q9H1A3 318 aa12.17□□□□□ -0.46
LIMK1-208ENST00000538333 FAM230AA0A1W2PPH8 454 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 RPL36A-HNRNPH2H7BZ11 118 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 MSTNO14793 375 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 SPRY1O43609 319 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-208ENST00000538333 FARS2O95363 451 aaKnown RBP12.16□□□□□ -0.46
LIMK1-208ENST00000538333 NRASP01111 189 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF24P17028 368 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 RBP2P50120 134 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 CAMK2BQ13554 666 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF660Q6AZW8 331 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-208ENST00000538333 RTL6Q6ICC9 239 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 ALKAL2Q6UX46 152 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 LHFPL2Q6ZUX7 228 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 TUSC5Q8IXB3 177 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 CSNK2A3Q8NEV1 391 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 OR5AP2Q8NGF4 316 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 SCARB1Q8WTV0 552 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 SPSB4Q96A44 273 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 CPNE2Q96FN4 548 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-208ENST00000538333 RTBDNQ9BSG5 229 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-208ENST00000538333 C1QTNF5Q9BXJ0 243 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 TNFSF18Q9UNG2 199 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 IGKV1D-8A0A087WSZ0 117 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF587BE7ETH6 402 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 SDCBPO00560 298 aaPredicted RBP12.16□□□□□ -0.46
LIMK1-208ENST00000538333 NMBP08949 121 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 GABRR1P24046 479 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 ATP1B3P54709 279 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 ZNF345Q14585 488 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 STK11Q15831 433 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 COLCA1Q6ZS62 124 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 MDS2Q8NDY4 140 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 EMG1Q92979 244 aaKnown RBP12.16□□□□□ -0.46
LIMK1-208ENST00000538333 IP6K3Q96PC2 410 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 PRDM14Q9GZV8 571 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 TMEM9BQ9NQ34 198 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 ATPIF1Q9UII2 106 aa12.16□□□□□ -0.46
LIMK1-208ENST00000538333 HTR3BO95264 441 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 OR3A2P47893 321 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 SUPT4H1P63272 117 aaKnown RBP12.15□□□□□ -0.46
LIMK1-208ENST00000538333 ARF1P84077 181 aaKnown RBP12.15□□□□□ -0.46
LIMK1-208ENST00000538333 NSUN5P2Q63ZY6 315 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 RPUSD3Q6P087 351 aaKnown RBP12.15□□□□□ -0.46
LIMK1-208ENST00000538333 KCTD9Q7L273 389 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 SLC51BQ86UW2 128 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 TMEM17Q86X19 198 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 FNDC9Q8TBE3 224 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 BORCS8Q96FH0 119 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 COL25A1Q9BXS0 654 aaPredicted RBP12.15□□□□□ -0.46
LIMK1-208ENST00000538333 BCO1Q9HAY6 547 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 PLEKHJ1Q9NW61 149 aa12.15□□□□□ -0.46
LIMK1-208ENST00000538333 EHFQ9NZC4 300 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms