RNA–Protein interactions for RNA: ENST00000538176.5

CCDC78-215, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,166 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-215ENST00000538176 ALDH3A2P51648 485 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 CAV3P56539 151 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 ARF6P62330 175 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 KPNB1Q14974 876 aaKnown RBP17.74■□□□□ 0.43
CCDC78-215ENST00000538176 TMEM42Q69YG0 159 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 C1orf122Q6ZSJ8 110 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 KCTD20Q7Z5Y7 419 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 KIR3DL3Q8N743 410 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 C8orf46Q8TAG6 207 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 NPRL2Q8WTW4 380 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 AQP3Q92482 292 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 PPP1R14AQ96A00 147 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 EME1Q96AY2 570 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 TBX15Q96SF7 602 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 ADI1Q9BV57 179 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 WDR13Q9H1Z4 485 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 POLDIP2Q9Y2S7 368 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 PCDHGB1Q9Y5G3 927 aa17.74■□□□□ 0.43
CCDC78-215ENST00000538176 CENPVL3A0A0U1RRI6 287 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 SIGLEC5O15389 551 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 CCL1P22362 96 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 SLC9A3R2Q15599 337 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 HAGHLQ6PII5 290 aaPredicted RBP17.73■□□□□ 0.43
CCDC78-215ENST00000538176 METAP1DQ6UB28 335 aaPredicted RBP17.73■□□□□ 0.43
CCDC78-215ENST00000538176 BRD3OSQ6XYD6 125 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 TMEM86BQ8N661 226 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 FAM216BQ8N7L0 139 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 OR10H4Q8NGA5 316 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 OR5T2Q8NGG2 359 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 OR14K1Q8NGZ2 314 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 C10orf35Q96D05 121 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 DCTN5Q9BTE1 182 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 FGF23Q9GZV9 251 aaPredicted RBP17.73■□□□□ 0.43
CCDC78-215ENST00000538176 ACOXLQ9NUZ1 547 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 SLC25A10Q9UBX3 287 aaPredicted RBP17.73■□□□□ 0.43
CCDC78-215ENST00000538176 SLC22A13Q9Y226 551 aa17.73■□□□□ 0.43
CCDC78-215ENST00000538176 A0A1B0GTI1 187 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 NOS1APO75052 506 aaPredicted RBP17.72■□□□□ 0.43
CCDC78-215ENST00000538176 SFTPBP07988 381 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 AMY2BP19961 511 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 SNRPGP62308 76 aaKnown RBP17.72■□□□□ 0.43
CCDC78-215ENST00000538176 ACTC1P68032 377 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 ACTA1P68133 377 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 GUCA2AQ02747 115 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 IKZF1Q13422 519 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 C16orf87Q6PH81 154 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 Q6YL49 198 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 FAM220AQ7Z4H9 259 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 SEH1LQ96EE3 360 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 C1orf147Q96MC9 270 aaPredicted RBP17.72■□□□□ 0.43
CCDC78-215ENST00000538176 TBX5Q99593 518 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 SNTG1Q9NSN8 517 aa17.72■□□□□ 0.43
CCDC78-215ENST00000538176 CAB39Q9Y376 341 aaPredicted RBP17.72■□□□□ 0.43
CCDC78-215ENST00000538176 IGHV1-69DA0A0B4J2H0 117 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 H3BNX3 289 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 EI24O14681 340 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 MAGEB4O15481 346 aaPredicted RBP17.71■□□□□ 0.43
CCDC78-215ENST00000538176 FCN3O75636 299 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 RHBDL1O75783 438 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 RPP14O95059 124 aaKnown RBP17.71■□□□□ 0.43
CCDC78-215ENST00000538176 SERPINA3P01011 423 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 IGHV1-69P01742 117 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 HAAOP46952 286 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 GMFBP60983 142 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 OCLNQ16625 522 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 DEFB112Q30KQ8 113 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 SMIM21Q3B7S5 101 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 AWAT1Q58HT5 328 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 CATSPERDQ86XM0 798 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 EGFL6Q8IUX8 553 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 C9orf16Q9BUW7 83 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 PLEKHA1Q9HB21 404 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 SLC7A11Q9UPY5 501 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 POMT1Q9Y6A1 747 aa17.71■□□□□ 0.43
CCDC78-215ENST00000538176 J3QT63 122 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 SYT7O43581 403 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 MPZL2O60487 215 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 PSG2P11465 335 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 GABRA2P47869 451 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 BLMHQ13867 455 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 SSX6Q7RTT6 188 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 POC1AQ8NBT0 407 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 TBC1D15Q8TC07 691 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 RORBQ92753 470 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 LHX4Q969G2 390 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 SDSLQ96GA7 329 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 MRPL48Q96GC5 212 aaKnown RBP17.7■□□□□ 0.42
CCDC78-215ENST00000538176 GAFA1Q96PS6 74 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 DUX5Q96PT3 197 aa17.7■□□□□ 0.42
CCDC78-215ENST00000538176 TRBV23-1A0A0A0MS06 115 aa17.69■□□□□ 0.42
CCDC78-215ENST00000538176 PQLC2LA1A4F0 135 aa17.69■□□□□ 0.42
CCDC78-215ENST00000538176 ANKRD61A6NGH8 418 aa17.69■□□□□ 0.42
CCDC78-215ENST00000538176 POM121CA8CG34 1229 aa17.69■□□□□ 0.42
CCDC78-215ENST00000538176 GATBO75879 557 aaKnown RBP17.69■□□□□ 0.42
CCDC78-215ENST00000538176 UBCP0CG48 685 aaKnown RBP17.69■□□□□ 0.42
CCDC78-215ENST00000538176 RPL15P61313 204 aaKnown RBP17.69■□□□□ 0.42
CCDC78-215ENST00000538176 DGUOKQ16854 277 aa17.69■□□□□ 0.42
CCDC78-215ENST00000538176 ACP7Q6ZNF0 438 aa17.69■□□□□ 0.42
CCDC78-215ENST00000538176 VMO1Q7Z5L0 202 aa17.69■□□□□ 0.42
CCDC78-215ENST00000538176 SGMS2Q8NHU3 365 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms