RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 RNF222A6NCQ9 220 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 F5H0A9 414 aaPredicted RBP10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 LY86O95711 162 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 HLA-DQA2P01906 255 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 HCKP08631 526 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 EDN3P14138 238 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 IGFBP3P17936 291 aaPredicted RBP10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 ADCYAP1P18509 176 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 NPBWR1P48145 328 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 PMPCAQ10713 525 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 SKP2Q13309 424 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 MEP1BQ16820 701 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 C1orf100Q5SVJ3 147 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 TMEM244Q5VVB8 128 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 AWAT2Q6E213 333 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 RPUSD3Q6P087 351 aaKnown RBP10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 DNM1P34Q6PK57 102 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 DGAT2L6Q6ZPD8 337 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 GTPBP8Q8N3Z3 284 aaPredicted RBP10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 C16orf52Q8NHV5 167 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 RNF141Q8WVD5 230 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 METTL21AQ8WXB1 218 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 FAM46BQ96A09 425 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 SLC25A28Q96A46 364 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 IMMP1LQ96LU5 166 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 SCGB3A2Q96PL1 93 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 S100A13Q99584 98 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 VN1R1Q9GZP7 353 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 CHST6Q9GZX3 395 aa10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 GAR1Q9NY12 217 aaKnown RBP10.25□□□□□ -0.77
CHRNB1-202ENST00000536404 FGF16O43320 207 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 SLC25A12O75746 678 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 F13BP05160 661 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 ISG15P05161 165 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 HOXB5P09067 269 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 SPARCP09486 303 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 ZNF735P0CB33 412 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 PAX1P15863 534 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 HOXA5P20719 270 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 ZBTB25P24278 435 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 CXCR1P25024 350 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 BDKRB2P30411 391 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 PPICP45877 212 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 CDX1P47902 265 aaPredicted RBP10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 CX3CR1P49238 355 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 TNFSF10P50591 281 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 CCR4P51679 360 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 DCAF7P61962 342 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 GAGE1Q13065 139 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 GXYLT1Q4G148 440 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 ACTBL2Q562R1 376 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 ZNF324BQ6AW86 544 aaPredicted RBP10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 EIF5AL1Q6IS14 154 aaKnown RBP10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 FAM180AQ6UWF9 173 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 LANCL3Q6ZV70 420 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 CATSPERDQ86XM0 798 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 TGIF2LXQ8IUE1 241 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 OR1J2Q8NGS2 313 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 HAS2Q92819 552 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 C14orf79Q96F83 325 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 TSSK2Q96PF2 358 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 TAAR6Q96RI8 345 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 SYT4Q9H2B2 425 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 TREM1Q9NP99 234 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 B9D1Q9UPM9 204 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 POMT1Q9Y6A1 747 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 SCN2AQ99250 2005 aa10.24□□□□□ -0.77
CHRNB1-202ENST00000536404 PRSS37A4D1T9 235 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 H0YIG0 161 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 LDLRAD4O15165 306 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 NSA2O95478 260 aaKnown RBP10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 IGHMP01871 453 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 IFNA6P05013 189 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 RPL27P61353 136 aaKnown RBP10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 PLA2G7Q13093 441 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 TOMM34Q15785 309 aaPredicted RBP10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 SGCBQ16585 318 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 SCGB2B2Q4G0G5 96 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 AARDQ4LEZ3 155 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 GLYATL3Q5SZD4 288 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 DEGS2Q6QHC5 323 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 CPEB2Q7Z5Q1 589 aaKnown RBP10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 ZNF615Q8N8J6 731 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 OR10AC1Q8NH08 325 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 PPP1R1CQ8WVI7 109 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 ASB5Q8WWX0 329 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 DVL3Q92997 716 aaPredicted RBP10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 ARSGQ96EG1 525 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 SLC25A44Q96H78 314 aaPredicted RBP10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 NMES1Q9C002 83 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 SEC61A2Q9H9S3 476 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 UQCC1Q9NVA1 299 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 KCNG2Q9UJ96 466 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 R4GMQ9 66 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 LRBAP50851 2863 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 MYO7BQ6PIF6 2116 aa10.23□□□□□ -0.77
CHRNB1-202ENST00000536404 ELOA3CA0A087WX78 387 aaPredicted RBP10.22□□□□□ -0.77
CHRNB1-202ENST00000536404 TRAV17A0A0B4J275 112 aa10.22□□□□□ -0.77
CHRNB1-202ENST00000536404 A0A0B4J2A0 478 aa10.22□□□□□ -0.77
CHRNB1-202ENST00000536404 MEIS3P1A6NDR6 274 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms