RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 LIAT1Q6ZQX7 453 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 PIP4P2Q8N4L2 257 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 OR8B12Q8NGG6 310 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 ANGPTL6Q8NI99 470 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 CNN2Q99439 309 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 NPFFR1Q9GZQ6 430 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 C16orf95Q9H693 158 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 TVP23BQ9NYZ1 205 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 USE1Q9NZ43 259 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 SLC7A11Q9UPY5 501 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 PIGLQ9Y2B2 252 aa10.88□□□□□ -0.67
CLSTN3-205ENST00000535452 RNASEK-C17orf49H0YIS7 233 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 NXPH2O95156 264 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 NRASP01111 189 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 PSKH1P11801 424 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 DCTDP32321 178 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 ERVFRD-1P60508 538 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 RPL31P62899 125 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 EGR3Q06889 387 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 SRSF4Q08170 494 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 LRRC75BQ2VPJ9 315 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 BCL2L15Q5TBC7 163 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 Q6ZSV7 163 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 PRSS45Q7RTY3 260 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNF679Q8IYX0 411 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNF561Q8N587 486 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 BEND2Q8NDZ0 799 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 FAM110DQ8TAY7 271 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 GAFA1Q96PS6 74 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 AMELYQ99218 206 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 MNTQ99583 582 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 SSX3Q99909 188 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 PBOV1Q9GZY1 135 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 WDR13Q9H1Z4 485 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 GPR84Q9NQS5 396 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 PAPOLBQ9NRJ5 636 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 KRT84Q9NSB2 600 aa10.87□□□□□ -0.67
CLSTN3-205ENST00000535452 A0A0G2JK05 382 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 A0A1B0GW55 424 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNF670-ZNF695F2Z2N8 137 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 LOC110117498-PIK3R3F6TDL0 507 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 H3BUX3 64 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DHRS3O75911 302 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 TSPAN9O75954 239 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 CYB5AP00167 134 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 SERPINA3P01011 423 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 MRPL3P09001 348 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 OCM2P0CE71 109 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 OCMP0CE72 109 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4L2P0CJ85 424 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4L3P0CJ86 424 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4L4P0CJ87 422 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4L5P0CJ88 424 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4L6P0CJ89 424 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4L7P0CJ90 424 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 ALOX5APP20292 161 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 ATP6V1E1P36543 226 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 HAAOP46952 286 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 GYS2P54840 703 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 PROK1P58294 105 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 KLRD1Q13241 179 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DGUOKQ16854 277 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 FAM76BQ5HYJ3 339 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4L9Q6RFH8 374 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNRF1Q8ND25 227 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 SEH1LQ96EE3 360 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 SEMA6AQ9H2E6 1030 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 OR51I2Q9H344 312 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 VNN3Q9NY84 501 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DNAJB9Q9UBS3 223 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 DUX4Q9UBX2 424 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 FBLN5Q9UBX5 448 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 GLS2Q9UI32 602 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 PITPNC1Q9UKF7 332 aa10.86□□□□□ -0.67
CLSTN3-205ENST00000535452 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 PSMD9O00233 223 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 ALDOBP05062 364 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 KRT8P05787 483 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 PSG2P11465 335 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 ACKR3P25106 362 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 CDK5Q00535 292 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 MS4A2Q01362 244 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 HERPUD1Q15011 391 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 LY6EQ16553 131 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 AANATQ16613 207 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 CLVS2Q5SYC1 327 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 ASPHD2Q6ICH7 369 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 OR13D1Q8NGV5 346 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 OR2T27Q8NH04 317 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 OR51E1Q8TCB6 317 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 CANT1Q8WVQ1 401 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 CAPSLQ8WWF8 208 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 HPSE2Q8WWQ2 592 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 FOXRED1Q96CU9 486 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 NRBF2Q96F24 287 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 RANBP3Q9H6Z4 567 aaPredicted RBP10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 ZNF319Q9P2F9 582 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 OR14J1Q9UGF5 321 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 MAB21L2Q9Y586 359 aa10.85□□□□□ -0.67
CLSTN3-205ENST00000535452 SNX5Q9Y5X3 404 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms