RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 LRP3O75074 770 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 QDPRP09417 244 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 BLVRBP30043 206 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-226ENST00000533820 HTR5AP47898 357 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 ZP4Q12836 540 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 RPL7L1Q6DKI1 246 aaKnown RBP17.02■□□□□ 0.32
CAPN1-226ENST00000533820 KCNG3Q8TAE7 436 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 NUBPLQ8TB37 319 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 ZNF775Q96BV0 537 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-226ENST00000533820 URB1O60287 2271 aaKnown RBP17.02■□□□□ 0.32
CAPN1-226ENST00000533820 IGKV1-9A0A0C4DH69 117 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 TMEM176BQ3YBM2 270 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-226ENST00000533820 KRBOX4Q5JUW0 171 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 LRRC18Q8N456 261 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 KDF1Q8NAX2 398 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-226ENST00000533820 RTBDNQ9BSG5 229 aaPredicted RBP17.02■□□□□ 0.32
CAPN1-226ENST00000533820 B3GALT5Q9Y2C3 310 aa17.02■□□□□ 0.32
CAPN1-226ENST00000533820 A0A087X0M5 115 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 A0A1B0GX30 115 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 OR2J2O76002 312 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 SFT2D2O95562 160 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 FAHD2BQ6P2I3 314 aaPredicted RBP17.02■□□□□ 0.31
CAPN1-226ENST00000533820 PIGTQ969N2 578 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 FAHD2AQ96GK7 314 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 GFOD1Q9NXC2 390 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 ALKBH4Q9NXW9 302 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 DNAJB11Q9UBS4 358 aa17.02■□□□□ 0.31
CAPN1-226ENST00000533820 FGF16O43320 207 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 IGHG1P01857 330 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 TAS2R31P59538 309 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 DTX1Q86Y01 620 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 D2HGDHQ8N465 521 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 ISOC2Q96AB3 205 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 ZNF501Q96CX3 271 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-226ENST00000533820 CDC6Q99741 560 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 HDHD3Q9BSH5 251 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-226ENST00000533820 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-226ENST00000533820 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-226ENST00000533820 MED6O75586 246 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 CHRM2P08172 466 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 FOSL2P15408 326 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 CARFQ8N187 725 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 SMRP1Q8NCR6 262 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 MRPL13Q9BYD1 178 aaKnown RBP17.01■□□□□ 0.31
CAPN1-226ENST00000533820 NMES1Q9C002 83 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 RIMS4Q9H426 269 aaPredicted RBP17.01■□□□□ 0.31
CAPN1-226ENST00000533820 OPA3Q9H6K4 179 aa17.01■□□□□ 0.31
CAPN1-226ENST00000533820 FAHP16930 419 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 CDCP2Q5VXM1 449 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 OR2A2Q6IF42 318 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 C17orf82Q86X59 251 aaPredicted RBP17■□□□□ 0.31
CAPN1-226ENST00000533820 SLC30A7Q8NEW0 376 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 WNT5BQ9H1J7 359 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 OR10A2Q9H208 303 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 EML6Q6ZMW3 1958 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 IGHV3-15A0A0B4J1V0 119 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 F8VVB4 439 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 F8VWA3 439 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 SCGB1D2O95969 90 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 FAM157CP0CG43 387 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 PGA4P0DJD7 388 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 PGA3P0DJD8 388 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 GABRR1P24046 479 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 THEM4Q5T1C6 240 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 UQCC3Q6UW78 93 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 SYT13Q7L8C5 426 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 ANKRD37Q7Z713 158 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 NOXO1Q8NFA2 376 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 POC1BQ8TC44 478 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 DTD1Q8TEA8 209 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 HIST1H2BAQ96A08 127 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 SMOC1Q9H4F8 434 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 UQCC1Q9NVA1 299 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 IGKV1D-8A0A087WSZ0 117 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 A6NLC8 198 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 PIAS2O75928 621 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 ZNF43P17038 809 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 CYCSP99999 105 aaKnown RBP17■□□□□ 0.31
CAPN1-226ENST00000533820 PGAM5Q96HS1 289 aa17■□□□□ 0.31
CAPN1-226ENST00000533820 hCG_1809904A0A1W2PP81 198 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 A0A1W2PR64 198 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 A0A1W2PRV1 198 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 SOX15O60248 233 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 CPT2P23786 658 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 MPZP25189 248 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 MST1LQ2TV78 715 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 AADACL3Q5VUY0 350 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 C6orf201Q7Z4U5 140 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 ZNF561Q8N587 486 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 RHOFQ9HBH0 211 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 ZNF726A6NNF4 738 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 G3V3Y1 287 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 CD79AP11912 226 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 LPAR6P43657 344 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 GNG10P50151 68 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 KISS1Q15726 138 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 CHRFAM7AQ494W8 412 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 ADAM5Q6NVV9 412 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 OR56B1Q8NGI3 324 aa16.99■□□□□ 0.31
CAPN1-226ENST00000533820 STOML3Q8TAV4 291 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms