RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 C5orf51A6NDU8 294 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 MPTX1A8MV57 137 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 C9orf172C9J069 976 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 SPRY1O43609 319 aaPredicted RBP13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 OR2F2O95006 317 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 GABRR1P24046 479 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 GDF1P27539 372 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 DLSTP36957 453 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 GFRA1P56159 465 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 MTCP1P56278 107 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 OR2F1Q13607 317 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 SLC9A3R2Q15599 337 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 CEACAM16Q2WEN9 425 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 SULF2Q8IWU5 870 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 CSNK2A3Q8NEV1 391 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 S100A13Q99584 98 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 FOXB1Q99853 325 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 HDHD3Q9BSH5 251 aaPredicted RBP13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 MBD2Q9UBB5 411 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 NCKAP5O14513 1909 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 OR6C6A6NF89 314 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 LGALS8O00214 317 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 ADAP1O75689 374 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 LCATP04180 440 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 HOXD4P09016 255 aaPredicted RBP13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 GLRA1P23415 457 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 MPLP40238 635 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 RFC3P40938 356 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 CBX5P45973 191 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 LUMP51884 338 aaPredicted RBP13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 TAS2R31P59538 309 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 OVCH2Q7RTZ1 564 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 FOXJ2Q9P0K8 574 aa13.36□□□□□ -0.27
CACNA1E-208ENST00000533229 FAM230AA0A1W2PPH8 454 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 FIGNL2A6NMB9 653 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 SERPINE3A8MV23 424 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 SFT2D2O95562 160 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 PLATP00750 562 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 IGHV3-9P01782 118 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 CRHP06850 196 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 TMEM225BP0DP42 221 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 CPT2P23786 658 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 FPR2P25090 351 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 OR3A2P47893 321 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 TUSC1Q2TAM9 212 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 ANKRD55Q3KP44 614 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 KRTAP27-1Q3LI81 207 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 SKA3Q8IX90 412 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 PDZD9Q8IXQ8 264 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 OR5AP2Q8NGF4 316 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 THOC3Q96J01 351 aaKnown RBP13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 Q96M66 194 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 NECAB3Q96P71 396 aaPredicted RBP13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 WNT5BQ9H1J7 359 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 EHFQ9NZC4 300 aa13.35□□□□□ -0.27
CACNA1E-208ENST00000533229 KANTRA0A1W2PQU2 76 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 LNP1A1A4G5 178 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 A8MXK9 166 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 BCL2L11O43521 198 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 ZP3P21754 424 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 HTR5AP47898 357 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 UBA52P62987 128 aaKnown RBP13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 SCRN3Q0VDG4 424 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF528Q3MIS6 628 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 NKAPLQ5M9Q1 402 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 THAP6Q8TBB0 222 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 TAAR9Q96RI9 348 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 RNF126Q9BV68 326 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 MS4A7Q9GZW8 240 aaPredicted RBP13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 CHMP1AQ9HD42 196 aaPredicted RBP13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF701Q9NV72 531 aaPredicted RBP13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 LRFN1Q9P244 771 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 DHRS7CA6NNS2 312 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 NEURL1O76050 574 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 FGF2P09038 288 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 CELA3AP09093 270 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 RPS2P15880 293 aaKnown RBP13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 CNR1P21554 472 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 PSMB6P28072 239 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 TAGLNQ01995 201 aaKnown RBP13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 TAF9Q16594 264 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 FAM219AQ8IW50 185 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 BHLHE23Q8NDY6 225 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 SIGLEC12Q96PQ1 595 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 ZNF471Q9BX82 626 aaPredicted RBP13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 HES7Q9BYE0 225 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 OR2H1Q9GZK4 316 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 PPA2Q9H2U2 334 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 GPR35Q9HC97 309 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 PLEKHJ1Q9NW61 149 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 RASL12Q9NYN1 266 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 GPR160Q9UJ42 338 aa13.34□□□□□ -0.27
CACNA1E-208ENST00000533229 H0YIZ8 118 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 TRIM77I1YAP6 450 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 JMJD7P0C870 316 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 RPUSD3Q6P087 351 aaKnown RBP13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 ZSCAN4Q8NAM6 433 aaPredicted RBP13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 CCDC54Q8NEL0 328 aa13.33□□□□□ -0.28
CACNA1E-208ENST00000533229 SPSB1Q96BD6 273 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms