RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 CLN8Q9UBY8 286 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 CLEC2DQ9UHP7 191 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 IKZF2Q9UKS7 526 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 COPS3Q9UNS2 423 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 RHBDD3Q9Y3P4 386 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 AUP1Q9Y679 476 aa13.91□□□□□ -0.18
PKP3-209ENST00000533069 TRAV38-1A0A0B4J264 116 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 A0A0U1RQV5 110 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 TMEM269A0A1B0GVZ9 245 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 hCG_1807616A0A1W2PRN6 198 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 OOEPA6NGQ2 149 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 CST4P01036 141 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 TFAP2AP05549 437 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 CD1AP06126 327 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 PPIAL4GP0DN37 164 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 PSMB10P40306 273 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 ALDH3B2P48448 385 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 NPY4RP50391 375 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 HCCSP53701 268 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 NEDD8Q15843 81 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 YIPF7Q8N8F6 280 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 ZNF485Q8NCK3 441 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 OR1M1Q8NGA1 313 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 JMJD8Q96S16 334 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 MGLLQ99685 303 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 MICU1Q9BPX6 476 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 RTL8AQ9BWD3 113 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 FAM206AQ9NX38 181 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 GNG8Q9UK08 70 aa13.9□□□□□ -0.18
PKP3-209ENST00000533069 IGHV2-70DA0A0C4DH43 119 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 J3QLW9 94 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 LHBP01229 141 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 ZNF19P17023 458 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 FPR2P25090 351 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 PSMB9P28065 219 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 MAP2K4P45985 399 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 SRSF2Q01130 221 aaKnown RBP13.89□□□□□ -0.19
PKP3-209ENST00000533069 PAX2Q02962 417 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 PAX8Q06710 450 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 ARMCX4Q5H9R4 360 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 FDX2Q6P4F2 183 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 RPL22L1Q6P5R6 122 aaKnown RBP13.89□□□□□ -0.19
PKP3-209ENST00000533069 GPR141Q7Z602 305 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 WDR86Q86TI4 376 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 BPIFB2Q8N4F0 458 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 GCSAMQ8N6F7 178 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 BOLLQ8N9W6 283 aaKnown RBP13.89□□□□□ -0.19
PKP3-209ENST00000533069 SEMA6DQ8NFY4 1073 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 RAB40AQ8WXH6 277 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 UFD1Q92890 307 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 ITPKCQ96DU7 683 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 LYZL4Q96KX0 146 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 SUCNR1Q9BXA5 334 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 TLNRD1Q9H1K6 362 aa13.89□□□□□ -0.19
PKP3-209ENST00000533069 TMEM210A6NLX4 147 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 C3orf80F5H4A9 247 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 ACKR3P25106 362 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 PSMA1P25786 263 aaKnown RBP13.88□□□□□ -0.19
PKP3-209ENST00000533069 CD80P33681 288 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 MAP2K3P46734 347 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 CCR9P51686 369 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 HILS1P60008 231 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 PRDX4Q13162 271 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 TPBGQ13641 420 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 TRAM1Q15629 374 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 TIMM50Q3ZCQ8 353 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 OR2G6Q5TZ20 316 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 TEX36Q5VZQ5 186 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 WDR25Q64LD2 544 aaPredicted RBP13.88□□□□□ -0.19
PKP3-209ENST00000533069 SFRP4Q6FHJ7 346 aaPredicted RBP13.88□□□□□ -0.19
PKP3-209ENST00000533069 LYPD2Q6UXB3 125 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 ZNF841Q6ZN19 808 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 ZNF826PQ6ZT77 177 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 KRT74Q7RTS7 529 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 SSX6Q7RTT6 188 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 C19orf18Q8NEA5 215 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 GATAD2BQ8WXI9 593 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 THRSPQ92748 146 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 DACT3Q96B18 629 aaPredicted RBP13.88□□□□□ -0.19
PKP3-209ENST00000533069 PELI1Q96FA3 418 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 PBOV1Q9GZY1 135 aa13.88□□□□□ -0.19
PKP3-209ENST00000533069 NUFIP1Q9UHK0 495 aaKnown RBP13.88□□□□□ -0.19
PKP3-209ENST00000533069 MRM2Q9UI43 246 aaKnown RBP13.88□□□□□ -0.19
PKP3-209ENST00000533069 ZNF816-ZNF321PA0A0X1KG74 233 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 KIR2DS1A0A191URI9 304 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 ZNF850A8MQ14 1090 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 PRR32B1ATL7 298 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 PSMD9O00233 223 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 CCRL2O00421 344 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 VENTXO95231 258 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 MUC1P15941 1255 aaPredicted RBP13.87□□□□□ -0.19
PKP3-209ENST00000533069 CPEP16870 476 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 CFHR2P36980 270 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 OR12D2P58182 307 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 TP53I3Q53FA7 332 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 ZBTB37Q5TC79 503 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 CD276Q5ZPR3 534 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 COMMD2Q86X83 199 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 C11orf53Q8IXP5 236 aa13.87□□□□□ -0.19
PKP3-209ENST00000533069 ZDHHC23Q8IYP9 409 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms