RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 STUB1Q9UNE7 303 aa14.29□□□□□ -0.12
SF3B2-211ENST00000531041 CACNG2Q9Y698 323 aa14.29□□□□□ -0.12
SF3B2-211ENST00000531041 MAP1AP78559 2803 aaPredicted RBP14.28□□□□□ -0.12
SF3B2-211ENST00000531041 IGKV1-27A0A075B6S5 117 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 A6NLC8 198 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 ALDOBP05062 364 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 SRMP19623 302 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 FGF9P31371 208 aaPredicted RBP14.28□□□□□ -0.12
SF3B2-211ENST00000531041 CFHR2P36980 270 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 ALDH3B2P48448 385 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 PDLIM4P50479 330 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 ATP1B3P54709 279 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 DSCR9P59020 149 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 HSD17B12Q53GQ0 312 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 RPL3LQ92901 407 aaKnown RBP14.28□□□□□ -0.12
SF3B2-211ENST00000531041 HPS1Q92902 700 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 YIPF6Q96EC8 236 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 TMEM106BQ9NUM4 274 aa14.28□□□□□ -0.12
SF3B2-211ENST00000531041 NOTCH2Q04721 2471 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 LRRC30A6NM36 301 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 MAGEB3O15480 346 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 HCKP08631 526 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 GIFP27352 417 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 BDKRB2P30411 391 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 HAAOP46952 286 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 ART1P52961 327 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 MTCP1P56278 107 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 TMEM33P57088 247 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 RIN1Q13671 783 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 SHEQ5VZ18 495 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 CLEC2AQ6UVW9 174 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 WDR82Q6UXN9 313 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 ZNF826PQ6ZT77 177 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 OR13F1Q8NGS4 319 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 OR11L1Q8NGX0 322 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 TCF7L1Q9HCS4 588 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 C1orf123Q9NWV4 160 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 SCOCQ9UIL1 159 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 SSR3Q9UNL2 185 aa14.27□□□□□ -0.12
SF3B2-211ENST00000531041 CCDC168Q8NDH2 2452 aa14.27□□□□□ -0.13
SF3B2-211ENST00000531041 YLPM1P49750 1951 aaKnown RBP14.27□□□□□ -0.13
SF3B2-211ENST00000531041 MEGF11A6BM72 1044 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 TRIM64BA6NI03 449 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 TMEM178BH3BS89 294 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 J3QT63 122 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 NDUFS8O00217 210 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 CDIPTO14735 213 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 IRF2P14316 349 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 GADD45AP24522 165 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 MPZP25189 248 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 KISS1Q15726 138 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 CLEC12BQ2HXU8 276 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 Q5PR19 223 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 HAGHLQ6PII5 290 aaPredicted RBP14.26□□□□□ -0.13
SF3B2-211ENST00000531041 CRIP3Q6Q6R5 217 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 ANGPTL5Q86XS5 388 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 CALHM1Q8IU99 346 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 KRTAP1-3Q8IUG1 177 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 C1orf87Q8N0U7 546 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 OR52N4Q8NGI2 321 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 OR10Z1Q8NGY1 313 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 AQP3Q92482 292 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 FAM168AQ92567 244 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 CPNE2Q96FN4 548 aaPredicted RBP14.26□□□□□ -0.13
SF3B2-211ENST00000531041 SPACA5Q96QH8 159 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 PKIBQ9C010 78 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 OR51E2Q9H255 320 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 RNF7Q9UBF6 113 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 CSMD1Q96PZ7 3565 aa14.26□□□□□ -0.13
SF3B2-211ENST00000531041 CLDN25C9JDP6 229 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 LHBP01229 141 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 CALRP27797 417 aaKnown RBP14.25□□□□□ -0.13
SF3B2-211ENST00000531041 CARTPTQ16568 116 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 TIMM50Q3ZCQ8 353 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 GDPGP1Q6ZNW5 385 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 CDH26Q8IXH8 852 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 ZNF671Q8TAW3 534 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 C10orf105Q8TEF2 133 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 TMIGD2Q96BF3 282 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 SLITRK2Q9H156 845 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 TXNL4BQ9NX01 149 aaKnown RBP14.25□□□□□ -0.13
SF3B2-211ENST00000531041 DCAF16Q9NXF7 216 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 GSTK1Q9Y2Q3 226 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 POLDIP2Q9Y2S7 368 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 MYO9AB2RTY4 2548 aa14.25□□□□□ -0.13
SF3B2-211ENST00000531041 DOCK11Q5JSL3 2073 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 TRAV1-2A0A0B4J238 106 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 hCG_1807616A0A1W2PRN6 198 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 CYSRT1A8MQ03 144 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 FSTL3O95633 263 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 CYB5R3P00387 301 aaPredicted RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 MAS1P04201 325 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 ACAA1P09110 424 aaPredicted RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 RBMXP38159 391 aaKnown RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 RPL5P46777 297 aaKnown RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 IL24Q13007 206 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 HNRNPA0Q13151 305 aaKnown RBP14.24□□□□□ -0.13
SF3B2-211ENST00000531041 DDI2Q5TDH0 399 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 C22orf42Q6IC83 251 aa14.24□□□□□ -0.13
SF3B2-211ENST00000531041 RNF144BQ7Z419 303 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms