RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 ZP1P60852 638 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 ERVK11-1P61568 191 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 GNG3P63215 75 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 PLCXD3Q63HM9 321 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 C1QL2Q7Z5L3 287 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 C19orf18Q8NEA5 215 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 DNAAF1Q8NEP3 725 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 OR52N4Q8NGI2 321 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 OR13C9Q8NGT0 318 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 OR8S1Q8NH09 359 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 TRMT10AQ8TBZ6 339 aaKnown RBP9.04□□□□□ -0.96
NEDD8-205ENST00000527046 NPRL2Q8WTW4 380 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 FAM168AQ92567 244 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 UFD1Q92890 307 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 ERGIC1Q969X5 290 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 SPACA5Q96QH8 159 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 NKX3-1Q99801 234 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-205ENST00000527046 MICU1Q9BPX6 476 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 RTL8AQ9BWD3 113 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 BPESC1Q9GZL8 116 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 EGLN1Q9GZT9 426 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 MYOZ1Q9NP98 299 aaPredicted RBP9.04□□□□□ -0.96
NEDD8-205ENST00000527046 NOX4Q9NPH5 578 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 C14orf119Q9NWQ9 140 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 C1orf123Q9NWV4 160 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 NDUFB11Q9NX14 153 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 MTCH1Q9NZJ7 389 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 WIPI2Q9Y4P8 454 aa9.04□□□□□ -0.96
NEDD8-205ENST00000527046 OTOGQ6ZRI0 2925 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 MED13LQ71F56 2210 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 FAM230AA0A1W2PPH8 454 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 LRP5LA4QPB2 252 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 TMEM210A6NLX4 147 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 ANXA2P2A6NMY6 339 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 TPD52L2O43399 206 aaKnown RBP9.03□□□□□ -0.96
NEDD8-205ENST00000527046 SULT1B1O43704 296 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 FSTL3O95633 263 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 ACAA1P09110 424 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-205ENST00000527046 UCHL1P09936 223 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 FSTP19883 344 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 IL2RGP31785 369 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 DSCR9P59020 149 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 LMO4P61968 165 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 ZMYND11Q15326 602 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 NEDD8Q15843 81 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 HFEQ30201 348 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 AVPI1Q5T686 147 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 ASCL4Q6XD76 172 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 CEACAM19Q7Z692 300 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 LRRTM1Q86UE6 522 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 LRRC28Q86X40 367 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-205ENST00000527046 FTMTQ8N4E7 242 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 OR5D14Q8NGL3 314 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 TSEN15Q8WW01 171 aaKnown RBP9.03□□□□□ -0.96
NEDD8-205ENST00000527046 FCGR1BQ92637 280 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 YIPF6Q96EC8 236 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 ZNF488Q96MN9 340 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 REG4Q9BYZ8 158 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 WDR13Q9H1Z4 485 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 ABCB9Q9NP78 766 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 RNF7Q9UBF6 113 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 FOXJ3Q9UPW0 622 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 NOP16Q9Y3C1 178 aaKnown RBP9.03□□□□□ -0.96
NEDD8-205ENST00000527046 NPTNQ9Y639 398 aa9.03□□□□□ -0.96
NEDD8-205ENST00000527046 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-205ENST00000527046 TRDV1A0A1B0GX56 115 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 SRRM5B3KS81 715 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 RNF223E7ERA6 249 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 NDUFS8O00217 210 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 GABRPO00591 440 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 NOS1APO75052 506 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-205ENST00000527046 ALDOBP05062 364 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 ERCC1P07992 297 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-205ENST00000527046 CSF3P09919 207 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 ZNF20P17024 532 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 SRMP19623 302 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 PSMB9P28065 219 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 GABRA5P31644 462 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 HAAOP46952 286 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 ALDH3B2P48448 385 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 KRTAP1-1Q07627 177 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 TEX36Q5VZQ5 186 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 HAGHLQ6PII5 290 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-205ENST00000527046 OR10Z1Q8NGY1 313 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 LRRC29Q8WV35 223 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 C1orf147Q96MC9 270 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-205ENST00000527046 HIST1H2AAQ96QV6 131 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 TMUB1Q9BVT8 246 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 OR51E2Q9H255 320 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 FN3KRPQ9HA64 309 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 PLEKHA1Q9HB21 404 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 HES4Q9HCC6 221 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 TEX15Q9BXT5 2789 aa9.02□□□□□ -0.97
NEDD8-205ENST00000527046 ABCA2Q9BZC7 2435 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 J3QT63 122 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 CCRL2O00421 344 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 AKR7A2O43488 359 aa9.01□□□□□ -0.97
NEDD8-205ENST00000527046 SPRY1O43609 319 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-205ENST00000527046 GATBO75879 557 aaKnown RBP9.01□□□□□ -0.97
NEDD8-205ENST00000527046 SERPINA3P01011 423 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms