RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

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Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 DBX2Q6ZNG2 339 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 C6orf201Q7Z4U5 140 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 HSD17B13Q7Z5P4 300 aaPredicted RBP15.32■□□□□ 0.04
USH1C-205ENST00000527020 SLC38A6Q8IZM9 456 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 GALNT11Q8NCW6 608 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 OR5AP2Q8NGF4 316 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 OR2V1Q8NHB1 315 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 FGFBP3Q8TAT2 258 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 THAP6Q8TBB0 222 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 NMES1Q9C002 83 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 CHMP1AQ9HD42 196 aaPredicted RBP15.32■□□□□ 0.04
USH1C-205ENST00000527020 EHFQ9NZC4 300 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 COQ3Q9NZJ6 369 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 GPR160Q9UJ42 338 aa15.32■□□□□ 0.04
USH1C-205ENST00000527020 TRAPPC6AO75865 159 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 F10P00742 488 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 TAS2R46P59540 309 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 ANKRD55Q3KP44 614 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.31■□□□□ 0.04
USH1C-205ENST00000527020 GALNTL5Q7Z4T8 443 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 EIF4E3Q8N5X7 224 aaKnown RBP15.31■□□□□ 0.04
USH1C-205ENST00000527020 S100A13Q99584 98 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 MICU1Q9BPX6 476 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 RNF126Q9BV68 326 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 BARX1Q9HBU1 254 aaPredicted RBP15.31■□□□□ 0.04
USH1C-205ENST00000527020 RYDENQ9NUL5 291 aaKnown RBP15.31■□□□□ 0.04
USH1C-205ENST00000527020 P4HTMQ9NXG6 502 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 TRBV6-7A0A0A0MS04 114 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 CA11O75493 328 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 ADAP1O75689 374 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 SERPINA7P05543 415 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 GLRA1P23415 457 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 GABRR1P24046 479 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 NUP62P37198 522 aaPredicted RBP15.31■□□□□ 0.04
USH1C-205ENST00000527020 OR3A2P47893 321 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 MTCP1P56278 107 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 PSG4Q00888 419 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 FOXO1Q12778 655 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 ZNF528Q3MIS6 628 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 MOB3CQ70IA8 216 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 PXT1Q8NFP0 134 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 RHBDD1Q8TEB9 315 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 SPRY4Q9C004 299 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 ZNF581Q9P0T4 197 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 MRPS18CQ9Y3D5 142 aaKnown RBP15.31■□□□□ 0.04
USH1C-205ENST00000527020 CSAG2Q9Y5P2 127 aa15.31■□□□□ 0.04
USH1C-205ENST00000527020 A0A0B4J2A0 478 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 MPTX1A8MV57 137 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 H0YIZ8 118 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 ANGPTL7O43827 346 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 TMEM225BP0DP42 221 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 GFRA1P56159 465 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 SIGLEC14Q08ET2 396 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 SCRN3Q0VDG4 424 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 SPSB1Q96BD6 273 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 ZNF845Q96IR2 970 aaPredicted RBP15.3■□□□□ 0.04
USH1C-205ENST00000527020 CDC6Q99741 560 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 FOXB1Q99853 325 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 HDHD3Q9BSH5 251 aaPredicted RBP15.3■□□□□ 0.04
USH1C-205ENST00000527020 ZNF471Q9BX82 626 aaPredicted RBP15.3■□□□□ 0.04
USH1C-205ENST00000527020 WNT5BQ9H1J7 359 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 PPA2Q9H2U2 334 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 SHPKQ9UHJ6 478 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 SESN1Q9Y6P5 492 aa15.3■□□□□ 0.04
USH1C-205ENST00000527020 SPRY1O43609 319 aaPredicted RBP15.29■□□□□ 0.04
USH1C-205ENST00000527020 LCATP04180 440 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 HOXD4P09016 255 aaPredicted RBP15.29■□□□□ 0.04
USH1C-205ENST00000527020 CYB561P49447 251 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 CEACAM16Q2WEN9 425 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 NSUN5P2Q63ZY6 315 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 TMEM17Q86X19 198 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 ABHD3Q8WU67 409 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 RAB18Q9NP72 206 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 GDF1P27539 372 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 HTR5AP47898 357 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 PPA1Q15181 289 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 TMEM42Q69YG0 159 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 STPG2Q8N412 459 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 BHLHE23Q8NDY6 225 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 EMG1Q92979 244 aaKnown RBP15.29■□□□□ 0.04
USH1C-205ENST00000527020 RRNAD1Q96FB5 475 aaKnown RBP15.29■□□□□ 0.04
USH1C-205ENST00000527020 NECAB3Q96P71 396 aaPredicted RBP15.29■□□□□ 0.04
USH1C-205ENST00000527020 SCGB3A2Q96PL1 93 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 OR2H1Q9GZK4 316 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 GPR35Q9HC97 309 aa15.29■□□□□ 0.04
USH1C-205ENST00000527020 FAM230AA0A1W2PPH8 454 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 KRBOX1C9JBD0 128 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 CYTIPO60759 359 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 PGAM2P15259 253 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 ARL6IP1Q15041 203 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 CHRFAM7AQ494W8 412 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 RIPPLY2Q5TAB7 128 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 RPUSD3Q6P087 351 aaKnown RBP15.28■□□□□ 0.04
USH1C-205ENST00000527020 RAB11FIP2Q7L804 512 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 SKA3Q8IX90 412 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 ZSCAN4Q8NAM6 433 aaPredicted RBP15.28■□□□□ 0.04
USH1C-205ENST00000527020 INO80EQ8NBZ0 244 aaPredicted RBP15.28■□□□□ 0.04
USH1C-205ENST00000527020 PHYHIPLQ96FC7 376 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 SHARPINQ9H0F6 387 aa15.28■□□□□ 0.04
USH1C-205ENST00000527020 ZNF701Q9NV72 531 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms