RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 BRI3O95415 125 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 PAHP00439 452 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 MT-ATP6P00846 226 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OPN1SWP03999 348 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 GYPCP04921 128 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RPS17P08708 135 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 MMP7P09237 267 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 TPM1P09493 284 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TFPTP0C1Z6 253 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR8U8P0C7N1 319 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR8G3PP0DMU2 310 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR5H8P0DN80 308 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 BCKDHAP12694 445 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SKILP12757 684 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CD1DP15813 335 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 IGLL1P15814 213 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RPS2P15880 293 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 ZNF43P17038 809 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ATP6V1C1P21283 382 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RPS4Y1P22090 263 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 OMGP23515 440 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 IVDP26440 423 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SFTPDP35247 375 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 GGT2P36268 569 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CD200P41217 278 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CRATP43155 626 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ALDH3B1P43353 468 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 MAGEB1P43366 347 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CDX1P47902 265 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 KLK7P49862 253 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ARHGDIAP52565 204 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ARHGDIBP52566 201 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CDKN2DP55273 166 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 FOXA1P55317 472 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CAV3P56539 151 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 KRTAP10-10P60014 251 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 FGF12P61328 243 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 PCBD1P61457 104 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RPL23AP62750 156 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 CCL8P80075 99 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LCN2P80188 198 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TNFRSF9Q07011 255 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RBBP4Q09028 425 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TRAP1Q12931 704 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 MAB21L1Q13394 359 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 IL18R1Q13478 541 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SNX1Q13596 522 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 KIR2DS1Q14954 304 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RASA2Q15283 850 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TSNQ15631 228 aaKnown RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 CD226Q15762 336 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ZNF79Q15937 498 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SNCBQ16143 134 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 STX1AQ16623 288 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 HIST3H3Q16695 136 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 FAM83EQ2M2I3 478 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SMU1Q2TAY7 513 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LGALS9BQ3B8N2 356 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 ANKDD1AQ495B1 522 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 HIKESHIQ53FT3 197 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 XKR7Q5GH72 579 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 DMRTC1Q5HYR2 192 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 DEFB121Q5J5C9 76 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 FAM27D1Q5T7N8 215 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LGSNQ5TDP6 509 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 MINOS1Q5TGZ0 78 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 FAM91A1Q658Y4 838 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LEMD1Q68G75 181 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR5M10Q6IEU7 315 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR4A47Q6IF82 309 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 FAM71E1Q6IPT2 247 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 EMBQ6PCB8 327 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LINC00322Q6ZN03 302 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 ZNF836Q6ZNA1 936 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 AAED1Q7RTV5 226 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 C6orf120Q7Z4R8 191 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 MDP1Q86V88 176 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 VRK2Q86Y07 508 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 EGFL6Q8IUX8 553 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CCDC50Q8IVM0 306 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LINC00346Q8IVM7 164 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 PRR22Q8IZ63 422 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 LSMEM1Q8N8F7 131 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 COX18Q8N8Q8 333 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SLC30A7Q8NEW0 376 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR4D10Q8NGI6 311 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR6Q1Q8NGQ2 317 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 OR6X1Q8NH79 312 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RDH11Q8TC12 318 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RPS4Y2Q8TD47 263 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 KLF14Q8TD94 323 aaPredicted RBP1.11□□□□□ -2.23
CD44-212ENST00000524922 C22orf15Q8WYQ4 148 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CCL17Q92583 94 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CDKL2Q92772 493 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 SLAMF9Q96A28 289 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 RASD2Q96D21 266 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 MALSU1Q96EH3 234 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CERS2Q96G23 380 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 CCDC42Q96M95 316 aa1.11□□□□□ -2.23
CD44-212ENST00000524922 TSNARE1Q96NA8 513 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms