RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 RNF122Q9H9V4 155 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 NXT1Q9UKK6 140 aaKnown RBP11.58□□□□□ -0.56
CAPN1-202ENST00000524773 B3GALT5Q9Y2C3 310 aa11.58□□□□□ -0.56
CAPN1-202ENST00000524773 COL4A2P08572 1712 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 MSTNO14793 375 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 CST4P01036 141 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 AGAP20933 346 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 OMGP23515 440 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 YPEL5P62699 121 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 CCL20P78556 96 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 LYZL2Q7Z4W2 148 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 CPEB2Q7Z5Q1 589 aaKnown RBP11.57□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF565Q8N9K5 539 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 RHOVQ96L33 236 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 PIAS3Q9Y6X2 628 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 NBEAQ8NFP9 2946 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 CDRT15L2A8MXV6 281 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 TNFSF12O43508 249 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 IFNA2P01563 188 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 THBS4P35443 961 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 RABIFP47224 123 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 VAX1Q5SQQ9 334 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 TMEM182Q6ZP80 229 aaPredicted RBP11.57□□□□□ -0.56
CAPN1-202ENST00000524773 Q7L0L9 218 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF561Q8N587 486 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 ARRDC1Q8N5I2 433 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 SUMF1Q8NBK3 374 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 KCNG3Q8TAE7 436 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 FNDC9Q8TBE3 224 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF285Q96NJ3 590 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 PRRX2Q99811 253 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 SERINC1Q9NRX5 453 aa11.57□□□□□ -0.56
CAPN1-202ENST00000524773 MT-ND4LP03901 98 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 SNCAP37840 140 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 RPS10P46783 165 aaKnown RBP11.56□□□□□ -0.56
CAPN1-202ENST00000524773 CLRN1P58418 232 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 KISS1Q15726 138 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 LHFPL1Q86WI0 220 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 LRRC18Q8N456 261 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 OR52M1Q8NGK5 317 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 SLC22A8Q8TCC7 542 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 VN1R1Q9GZP7 353 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 COPS7AQ9UBW8 275 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 ABCA7Q8IZY2 2146 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 MBPP02686 304 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-202ENST00000524773 DBHP09172 617 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 TMEM225BP0DP42 221 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 FCGR2AP12318 317 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 LYL1P12980 280 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 PEG10Q86TG7 708 aaKnown RBP11.56□□□□□ -0.56
CAPN1-202ENST00000524773 OR5L1Q8NGL2 311 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 OR11L1Q8NGX0 322 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 OR2AJ1Q8NGZ0 328 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 FAM213BQ8TBF2 198 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 GNRHR2Q96P88 292 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 FAAP24Q9BTP7 215 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 SEBOXQ9HB31 216 aaPredicted RBP11.56□□□□□ -0.56
CAPN1-202ENST00000524773 PARP11Q9NR21 331 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 B3GAT1Q9P2W7 334 aa11.56□□□□□ -0.56
CAPN1-202ENST00000524773 C14orf166Q9Y224 244 aaKnown RBP11.56□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF239Q16600 458 aaKnown RBP11.55□□□□□ -0.56
CAPN1-202ENST00000524773 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OGFOD3Q6PK18 319 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 DNM1P34Q6PK57 102 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 SULF2Q8IWU5 870 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 TDHQ8IZJ6 230 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OR1L3Q8NH93 324 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 PECRQ9BY49 303 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 ZNF576Q9H609 170 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 KLHL13Q9P2N7 655 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 FER1L5A0AVI2 2057 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 SPRY1O43609 319 aaPredicted RBP11.55□□□□□ -0.56
CAPN1-202ENST00000524773 DEDDO75618 318 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 IGHV2-70P01814 119 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 CHRM2P08172 466 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 GSTP1P09211 210 aaKnown RBP11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OR5AC1P0C628 307 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 GLP1RP43220 463 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 NDUFA6P56556 154 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 OR1D5P58170 312 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 MYBPHQ13203 477 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 UBE2V2Q15819 145 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 CRIP3Q6Q6R5 217 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 GGACTQ9BVM4 153 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 SCRT1Q9BWW7 348 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 EGLN1Q9GZT9 426 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 CHST11Q9NPF2 352 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 PARPBPQ9NWS1 579 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 TMEM131Q92545 1883 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 RALGAPA1Q6GYQ0 2036 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 IGKV3D-11A0A0A0MRZ8 115 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 IFITM10A6NMD0 228 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 NUDT19A8MXV4 375 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 H7C1Q1 480 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 FOLR2P14207 255 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 FOLR1P15328 257 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 PNLIPP16233 465 aa11.55□□□□□ -0.56
CAPN1-202ENST00000524773 DAP3P51398 398 aaKnown RBP11.55□□□□□ -0.56
CAPN1-202ENST00000524773 PIGPP57054 158 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms