RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 TWF1Q12792 350 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CDH17Q12864 832 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 C16orf72Q14CZ0 275 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 ZBTB6Q15916 424 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CYHR1Q6ZMK1 362 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 MBOAT1Q6ZNC8 495 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 SSX9Q7RTT3 188 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 TMCO2Q7Z6W1 182 aaPredicted RBP3.94□□□□□ -1.78
SKP1-213ENST00000524288 LINC00523Q86TU6 105 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 DHFR2Q86XF0 187 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CLVS1Q8IUQ0 354 aaPredicted RBP3.94□□□□□ -1.78
SKP1-213ENST00000524288 OR52K1Q8NGK4 314 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 OR10G9Q8NGN4 311 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 LYPD6BQ8NI32 183 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 UBA3Q8TBC4 463 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 SPPL2BQ8TCT7 592 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 RAB2BQ8WUD1 216 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 FAM3DQ96BQ1 224 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 PIK3IP1Q96FE7 263 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 AURKBQ96GD4 344 aaPredicted RBP3.94□□□□□ -1.78
SKP1-213ENST00000524288 CENPNQ96H22 339 aaPredicted RBP3.94□□□□□ -1.78
SKP1-213ENST00000524288 NRTNQ99748 197 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 HOPXQ9BPY8 73 aaPredicted RBP3.94□□□□□ -1.78
SKP1-213ENST00000524288 MROQ9BYG7 248 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CXorf21Q9HAI6 301 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CTPS2Q9NRF8 586 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 ABCB10Q9NRK6 738 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 PSME2Q9UL46 239 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 ST3GAL6Q9Y274 331 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 ERGIC3Q9Y282 383 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 NDUFAF1Q9Y375 327 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 CACNG2Q9Y698 323 aa3.94□□□□□ -1.78
SKP1-213ENST00000524288 ALPK3Q96L96 1907 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 KIF26AQ9ULI4 1882 aaPredicted RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 A0A0B4J2A0 478 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 DHRS12A0PJE2 317 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 A8MT66 165 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 H0YIV9 168 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 UBDO15205 165 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 EIF4E2O60573 245 aaKnown RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 E2F6O75461 281 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 RBP1P09455 135 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 OCM2P0CE71 109 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 OCMP0CE72 109 aaPredicted RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 HOXB8P17481 243 aaPredicted RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 HRH1P35367 487 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 RAB9AP51151 201 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 SP4Q02446 784 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 PMS2P3Q13401 168 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 CLINT1Q14677 625 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 XKR4Q5GH76 650 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 RBM48Q5RL73 367 aaKnown RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 NANOGP8Q6NSW7 305 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 TTC33Q6PID6 262 aaPredicted RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 CERS6Q6ZMG9 384 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 OAFQ86UD1 273 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 FUNDC1Q8IVP5 155 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 CBR4Q8N4T8 237 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 COMMD1Q8N668 190 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 SNX31Q8N9S9 440 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 MCOLN3Q8TDD5 553 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 KCTD4Q8WVF5 259 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 ELSPBP1Q96BH3 223 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 TMA16Q96EY4 203 aaKnown RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 CPB2Q96IY4 423 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 CGREF1Q99674 301 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 CIB1Q99828 191 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 C1orf50Q9BV19 199 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 SLC7A5P2Q9GIP4 190 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 POMKQ9H5K3 350 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 POPDC3Q9HBV1 291 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 ANKHQ9HCJ1 492 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 FBXO8Q9NRD0 319 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 TREX1Q9NSU2 369 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 GID8Q9NWU2 228 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 MRPL22Q9NWU5 206 aaKnown RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 USE1Q9NZ43 259 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 ADA2Q9NZK5 511 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 SHPKQ9UHJ6 478 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 NUFIP1Q9UHK0 495 aaKnown RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 ACOT9Q9Y305 439 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 FAM32AQ9Y421 112 aaKnown RBP3.93□□□□□ -1.78
SKP1-213ENST00000524288 HES2Q9Y543 173 aa3.93□□□□□ -1.78
SKP1-213ENST00000524288 TRBV9A0A0B4J1U6 114 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 TRAV25A0A0B4J276 109 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 PRSS37A4D1T9 235 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 PEX7O00628 323 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 KPNA4O00629 521 aaPredicted RBP3.92□□□□□ -1.78
SKP1-213ENST00000524288 AQP9O43315 295 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 CD5LO43866 347 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 AIREO43918 545 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 NPPAP01160 153 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 GNAO1P09471 354 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 TUBG1P23258 451 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 WARSP23381 471 aaKnown RBP3.92□□□□□ -1.78
SKP1-213ENST00000524288 RPS9P46781 194 aaKnown RBP3.92□□□□□ -1.78
SKP1-213ENST00000524288 CCR6P51684 374 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 CRISP3P54108 245 aa3.92□□□□□ -1.78
SKP1-213ENST00000524288 WNT4P56705 351 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms