RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 ZNF354AO60765 605 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 RGS11O94810 467 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 IFI6P09912 130 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 ADPRHL1Q8NDY3 354 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 FAM213BQ8TBF2 198 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 FBLIM1Q8WUP2 373 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 FAAP24Q9BTP7 215 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 SLC17A5Q9NRA2 495 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 V9GYH0 126 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 PDGFAP04085 211 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 SP1P08047 785 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 NKX2-1P43699 371 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 PIGPP57054 158 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 GVQW1Q8N7I0 195 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 APOBEC4Q8WW27 367 aaKnown RBP11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 PLPPR2Q96GM1 343 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 RNF150Q9ULK6 438 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 IGKV1D-42A0A075B6H8 117 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 TRIM64BA6NI03 449 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 SNRPGP15A8MWD9 76 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 THY1P04216 161 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 BTN1A1Q13410 526 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 PNLIPRP3Q17RR3 467 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNF658BQ4V348 819 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 PDLIM3Q53GG5 364 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMEM268Q5VZI3 342 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 GCM1Q9NP62 436 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 HEYLQ9NQ87 328 aaPredicted RBP11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 RALGAPA1Q6GYQ0 2036 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 UPK3AO75631 287 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 S100A2P29034 98 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 PMP22Q01453 160 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 PCOLCEQ15113 449 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 KRBOX4Q5JUW0 171 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 OR2Z1Q8NG97 314 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 OR4A16Q8NH70 328 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 FBXO17Q96EF6 278 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 GPR35Q9HC97 309 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNF391Q9UJN7 358 aa11.55□□□□□ -0.56
PCDHGB1-201ENST00000523390 TERTO14746 1132 aaKnown RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 SEMA7AO75326 666 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 RPP30P78346 268 aaKnown RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 SSBP1Q04837 148 aaKnown RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 TSPO2Q5TGU0 170 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNF574Q6ZN55 896 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 TTTY12Q9BZ98 90 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 PLK3Q9H4B4 646 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 OPA3Q9H6K4 179 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 NEUROG3Q9Y4Z2 214 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 K7ESF4 209 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 RGS13O14921 159 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 NDUFB6O95139 128 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 CYC1P08574 325 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 PSMB6P28072 239 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 MMP16P51512 607 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 ZNF79Q15937 498 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 OR2W3Q7Z3T1 314 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 LYG2Q86SG7 212 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 UPRTQ96BW1 309 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 WDR89Q96FK6 387 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 PRRX2Q99811 253 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 ANGPTL4Q9BY76 406 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 PARP12Q9H0J9 701 aaKnown RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 UNKLQ9H9P5 680 aaKnown RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 CACNA1DQ01668 2161 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 A0A1W2PPV4 95 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 ARRDC1Q8N5I2 433 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 FLVCR1-AS1Q8TAF5 88 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 CHRNA10Q9GZZ6 450 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 FAM212BQ9NTI7 297 aaPredicted RBP11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 NDRG3Q9UGV2 375 aa11.54□□□□□ -0.56
PCDHGB1-201ENST00000523390 ACTL6AO96019 429 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 COX6A1P12074 109 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 ATP1A1-AS1Q5TC04 95 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 SSX9Q7RTT3 188 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMEM251Q8N6I4 163 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 APCDD1LQ8NCL9 501 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 BOD1Q96IK1 185 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 SUCNR1Q9BXA5 334 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 GMDSO60547 372 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 CDC14BO60729 498 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 SP6Q3SY56 376 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 OR8G2PQ6IF36 304 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMEM68Q96MH6 324 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 UBL7Q96S82 380 aaPredicted RBP11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 EDARQ9UNE0 448 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 LRP3O75074 770 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMIGD3P0DMS9 266 aaPredicted RBP11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 KIR3DL2P43630 455 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 PPT1P50897 306 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 SMUG1Q53HV7 270 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 FAM209AQ5JX71 171 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 ATPAF1Q5TC12 328 aaPredicted RBP11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 RBMXL1Q96E39 390 aaKnown RBP11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 TECTBQ96PL2 329 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 GPX7Q96SL4 187 aaPredicted RBP11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 HES7Q9BYE0 225 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 TMEM38BQ9NVV0 291 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 NOTCH4Q99466 2003 aa11.53□□□□□ -0.56
PCDHGB1-201ENST00000523390 TOR1AO14656 332 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms