RNA–Protein interactions for RNA: ENST00000522796.1

HMGB4-204, Transcript of high mobility group box 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGB4, Length 2,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4-204ENST00000522796 DHRS2Q13268 280 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 ACOT6Q3I5F7 207 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 ZNF658BQ4V348 819 aaPredicted RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 LRRC10Q5BKY1 277 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TGIF2LYQ8IUE0 185 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 ZNF615Q8N8J6 731 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 OR5K2Q8NHB8 316 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 DIO2Q92813 273 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 S100A16Q96FQ6 103 aaKnown RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 MACROD1Q9BQ69 325 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 POLR2J3Q9H1A7 115 aaKnown RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 TMEM106BQ9NUM4 274 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 GALPQ9UBC7 116 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 MTFP1Q9UDX5 166 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 NXT1Q9UKK6 140 aaKnown RBP7.34□□□□□ -1.23
HMGB4-204ENST00000522796 MMP17Q9ULZ9 603 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 HHLA2Q9UM44 414 aa7.34□□□□□ -1.23
HMGB4-204ENST00000522796 PIKFYVEQ9Y2I7 2098 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 PLXND1Q9Y4D7 1925 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 J3KTA2 159 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SOX1O00570 391 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SPRY1O43609 319 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 DUSP11O75319 330 aaKnown RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 TRAPPC6AO75865 159 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 TNFRSF1BP20333 461 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 COL9A1P20849 921 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 AK4P27144 223 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CTRLP40313 264 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 OR1E2P47887 323 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SOX2P48431 317 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CYCSP99999 105 aaKnown RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 FOXF1Q12946 379 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 PAFAH1B3Q15102 231 aaKnown RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CDKN3Q16667 212 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 ZNF585BQ52M93 769 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 Q6ZN92 141 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 APOBEC3FQ8IUX4 373 aaKnown RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 LGI3Q8N145 548 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CHST4Q8NCG5 386 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 OR4K1Q8NGD4 311 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 ABHD4Q8TB40 342 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 ZNF296Q8WUU4 475 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 NRGNQ92686 78 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 LINC00615Q96LM1 132 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 RNF126Q9BV68 326 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 NMES1Q9C002 83 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 TMEM39BQ9GZU3 492 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 GTSF1LQ9H1H1 148 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SLC25A18Q9H1K4 315 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CHST8Q9H2A9 424 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SLC2A6Q9UGQ3 507 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 FRMPD3Q5JV73 1810 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 COL18A1P39060 1754 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 TSC2P49815 1807 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SERINC4A6NH21 518 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 YDJCA8MPS7 323 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 ZNF891A8MT65 544 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 HCRTR1O43613 425 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 B3GALT2O43825 422 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 THY1P04216 161 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SMIM17P0DL12 118 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 GABRA6Q16445 453 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CEACAM21Q3KPI0 293 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 ANKRD16Q6P6B7 361 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 ZNF66Q6ZN08 573 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 GPSM1Q86YR5 675 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SAXO1Q8IYX7 474 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 C5orf17Q8NAS9 161 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 OR51A2Q8NGJ7 313 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 OR2Y1Q8NGV0 311 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 OR6K2Q8NGY2 324 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 ZNF417Q8TAU3 575 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 SARAFQ96BY9 339 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 TNFRSF13CQ96RJ3 184 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 NIPSNAP3BQ9BS92 247 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 INPP5EQ9NRR6 644 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 PLA2G2EQ9NZK7 142 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 CRIM1Q9NZV1 1036 aa7.33□□□□□ -1.24
HMGB4-204ENST00000522796 THAP10Q9P2Z0 257 aaPredicted RBP7.33□□□□□ -1.24
HMGB4-204ENST00000522796 PRSS37A4D1T9 235 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 OR6C6A6NF89 314 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 ARL5CA6NH57 179 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 OR4C45A6NMZ5 311 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 H7BYZ3 331 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 J3QR06 171 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 GAPDHP04406 335 aaKnown RBP7.32□□□□□ -1.24
HMGB4-204ENST00000522796 DBHP09172 617 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 JMJD7P0C870 316 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 ZNF286BP0CG31 522 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 CFHR2P36980 270 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 PRLHRP49683 370 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 PIGPP57054 158 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 PAFAH1B2P68402 229 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 SLC25A53Q5H9E4 307 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 OLIG3Q7RTU3 272 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 ZNF429Q86V71 674 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 PNKDQ8N490 385 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 GPR32P1Q8NGA4 272 aa7.32□□□□□ -1.24
HMGB4-204ENST00000522796 OR52E5Q8NH55 327 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms