RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 UBE2V2Q15819 145 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 KLF17Q5JT82 389 aaPredicted RBP14.83□□□□□ -0.04
CLK4-211ENST00000522556 STUMQ69YW2 141 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 XAF1Q6GPH4 301 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 OR5A2Q8NGI9 324 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 C22orf15Q8WYQ4 148 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 AQP3Q92482 292 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 ADAT3Q96EY9 351 aaPredicted RBP14.83□□□□□ -0.04
CLK4-211ENST00000522556 Q96MT0 163 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 HIST1H2AAQ96QV6 131 aa14.83□□□□□ -0.04
CLK4-211ENST00000522556 MRPS18AQ9NVS2 196 aaKnown RBP14.83□□□□□ -0.04
CLK4-211ENST00000522556 SOX21Q9Y651 276 aaPredicted RBP14.83□□□□□ -0.04
CLK4-211ENST00000522556 IGKV1-27A0A075B6S5 117 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 IGHV3OR16-10A0A075B7F0 116 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 ANKRD61A6NGH8 418 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 OR5B21A6NL26 309 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 SNTNA6NMZ2 147 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 OR4C45A6NMZ5 311 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 DVL1O14640 695 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 TMPRSS2O15393 492 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 IFNA2P01563 188 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 EPHA1P21709 976 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 PAX8Q06710 450 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 RAB40BQ12829 278 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 FDX2Q6P4F2 183 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 DHRSXQ8N5I4 330 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 OR10Z1Q8NGY1 313 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 RAB40AQ8WXH6 277 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 ERVK-18Q9QC07 812 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 RPL36Q9Y3U8 105 aaKnown RBP14.82□□□□□ -0.04
CLK4-211ENST00000522556 ATRQ13535 2644 aa14.82□□□□□ -0.04
CLK4-211ENST00000522556 FADS2O95864 444 aaKnown RBP14.81□□□□□ -0.04
CLK4-211ENST00000522556 HTR1AP08908 422 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 MUC1P15941 1255 aaPredicted RBP14.81□□□□□ -0.04
CLK4-211ENST00000522556 GATA3P23771 443 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 CAPGP40121 348 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 HAAOP46952 286 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 ETV1P50549 477 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 GTF2A1P52655 376 aaPredicted RBP14.81□□□□□ -0.04
CLK4-211ENST00000522556 ALKBH1Q13686 389 aaKnown RBP14.81□□□□□ -0.04
CLK4-211ENST00000522556 MICBQ29980 383 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 KRTAP24-1Q3LI83 254 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 OR2G6Q5TZ20 316 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 RNF144BQ7Z419 303 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 ANGPTL5Q86XS5 388 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 CALHM1Q8IU99 346 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 NUDT16L1Q9BRJ7 211 aaKnown RBP14.81□□□□□ -0.04
CLK4-211ENST00000522556 PLEKHA1Q9HB21 404 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 PCDHGB1Q9Y5G3 927 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 AUP1Q9Y679 476 aa14.81□□□□□ -0.04
CLK4-211ENST00000522556 IGKV1-9A0A0C4DH69 117 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 FAM230AA0A1W2PPH8 454 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 DHRS7CA6NNS2 312 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 UBCP0CG48 685 aaKnown RBP14.8□□□□□ -0.04
CLK4-211ENST00000522556 IGHV4-38-2P0DP08 117 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 CEBPDP49716 269 aaPredicted RBP14.8□□□□□ -0.04
CLK4-211ENST00000522556 ACTA2P62736 377 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 ACTG2P63267 376 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 IKZF1Q13422 519 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 DOC2BQ14184 412 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 TTC23Q5W5X9 447 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 KCTD20Q7Z5Y7 419 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 ST8SIA4Q92187 359 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 GAFA1Q96PS6 74 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 SLC6A7Q99884 636 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 PDCD1LG2Q9BQ51 273 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 CHST5Q9GZS9 411 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 OCEL1Q9H607 264 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 DCLRE1BQ9H816 532 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 ELL3Q9HB65 397 aaPredicted RBP14.8□□□□□ -0.04
CLK4-211ENST00000522556 FGF20Q9NP95 211 aaPredicted RBP14.8□□□□□ -0.04
CLK4-211ENST00000522556 C8orf4Q9NR00 106 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 DNAJB11Q9UBS4 358 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 CLEC2DQ9UHP7 191 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 METRNQ9UJH8 293 aa14.8□□□□□ -0.04
CLK4-211ENST00000522556 IGKV1D-17A0A075B6S4 117 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 J3QT63 122 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 PLATP00750 562 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 GLRA1P23415 457 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 KCNJ8Q15842 424 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 DGUOKQ16854 277 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 PHC2Q8IXK0 858 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 BCL6BQ8N143 479 aaPredicted RBP14.79□□□□□ -0.04
CLK4-211ENST00000522556 SYS1Q8N2H4 156 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 ANGPTL6Q8NI99 470 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 NANPQ8TBE9 248 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 RGP1Q92546 391 aaPredicted RBP14.79□□□□□ -0.04
CLK4-211ENST00000522556 NLKQ9UBE8 527 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 KAAG1Q9UBP8 84 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 ZNF222Q9UK12 451 aa14.79□□□□□ -0.04
CLK4-211ENST00000522556 SIRT4Q9Y6E7 314 aaPredicted RBP14.79□□□□□ -0.04
CLK4-211ENST00000522556 TRAV40A0A0B4J280 105 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 KIR2DS1A0A191URI9 304 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 RNF212BA8MTL3 300 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 F8VVB4 439 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 F8VWA3 439 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 XPNPEP2O43895 674 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 INMTO95050 263 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 ZFPL1O95159 310 aa14.78□□□□□ -0.04
CLK4-211ENST00000522556 VENTXO95231 258 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms