RNA–Protein interactions for RNA: ENST00000521918.6

SPIDR-216, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 558 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-216	ENST00000521918	TRAPPC2L	H3BP13	241 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	CIB2	O75838	187 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	LHB	P01229	141 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	APOC1	P02654	83 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	CSTB	P04080	98 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	ALPL	P05186	524 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	ANXA2	P07355	339 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	MRPL3	P09001	348 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	WNT2	P09544	360 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	H2BFM	P0C1H6	154 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	ANPEP	P15144	967 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	ZNF12	P17014	697 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	GATA3	P23771	443 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	CPT2	P23786	658 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	HSD11B1	P28845	292 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	DCTD	P32321	178 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	POLR2I	P36954	125 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	DDOST	P39656	456 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	HCCS	P53701	268 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	LCN2	P80188	198 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	MFGE8	Q08431	387 aa	Predicted RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	PMS2P11	Q13670	270 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	KPNB1	Q14974	876 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	OR8G1	Q15617	311 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	LCN1P1	Q5VSP4	162 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	NXNL2	Q5VZ03	156 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	DEGS2	Q6QHC5	323 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	ZNF841	Q6ZN19	808 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	C1orf122	Q6ZSJ8	110 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	CCDC121	Q6ZUS5	278 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	MEPCE	Q7L2J0	689 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	PEG10	Q86TG7	708 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	C11orf53	Q8IXP5	236 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	GCSAM	Q8N6F7	178 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	OR4M2	Q8NGB6	313 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	SPATA3	Q8NHX4	192 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	HPSE2	Q8WWQ2	592 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	PLEKHA8	Q96JA3	519 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	OR8B4	Q96RC9	309 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	CNN2	Q99439	309 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	PKP2	Q99959	881 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	OSBPL10	Q9BXB5	764 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	KRTAP4-11	Q9BYQ6	195 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	SEMA6A	Q9H2E6	1030 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	RGCC	Q9H4X1	137 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	NIPAL2	Q9H841	368 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	ADGRL4	Q9HBW9	690 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	MMP26	Q9NRE1	261 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	HAO2	Q9NYQ3	351 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	USE1	Q9NZ43	259 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	CTSZ	Q9UBR2	303 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	NOP16	Q9Y3C1	178 aa	Known RBP	4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	RHBDD3	Q9Y3P4	386 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	DOCK11	Q5JSL3	2073 aa		4.92	□□□□□ -1.62
SPIDR-216	ENST00000521918	MGAM2	Q2M2H8	2515 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	ACOD1	A6NK06	481 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	SAC3D1	A6NKF1	404 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	LRRC30	A6NM36	301 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	EI24	O14681	340 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	PHYH	O14832	338 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	FOXH1	O75593	365 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	SBK2	P0C263	348 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	EGR1	P18146	543 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	ADRA2C	P18825	462 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	CFL1	P23528	166 aa	Known RBP	4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	CD80	P33681	288 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	CFHR2	P36980	270 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	SRP14	P37108	136 aa	Known RBP	4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	PSMB10	P40306	273 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	RPS7	P62081	194 aa	Known RBP	4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	CSNK2B	P67870	215 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	ZNF154	Q13106	437 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	TAF13	Q15543	124 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	TIGD6	Q17RP2	521 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	FAM76B	Q5HYJ3	339 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	KLF17	Q5JT82	389 aa	Predicted RBP	4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	ZNF684	Q5T5D7	378 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	DCAF12L2	Q5VW00	463 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	TEX36	Q5VZQ5	186 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	FAHD2B	Q6P2I3	314 aa	Predicted RBP	4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	CFAP161	Q6P656	301 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	LYPD2	Q6UXB3	125 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	WDR82	Q6UXN9	313 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918		Q6ZPA2	131 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	DCDC5	Q6ZRR9	648 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918		Q6ZSR3	168 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	ZNF826P	Q6ZT77	177 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	SSX6	Q7RTT6	188 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	GID4	Q8IVV7	300 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	ZNF679	Q8IYX0	411 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	C1orf87	Q8N0U7	546 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	TCEANC	Q8N8B7	351 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	SPERT	Q8NA61	448 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	OR1M1	Q8NGA1	313 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	THEM6	Q8WUY1	208 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	ASB17	Q8WXJ9	295 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	FAHD2A	Q96GK7	314 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	PGAM5	Q96HS1	289 aa		4.91	□□□□□ -1.62
SPIDR-216	ENST00000521918	IL4I1	Q96RQ9	567 aa		4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms