RNA–Protein interactions for RNA: ENST00000521516.5

HMBOX1-208, Transcript of homeobox containing 1, humanhuman

TSL 2

Gene HMBOX1, Length 2,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-208ENST00000521516 NFKBIDQ8NI38 313 aa5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 ARPC1AQ92747 370 aa5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 UBE2E2Q96LR5 201 aa5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 OPA3Q9H6K4 179 aa5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 WDR55Q9H6Y2 383 aaPredicted RBP5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 GNB4Q9HAV0 340 aa5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 PNRC2Q9NPJ4 139 aaKnown RBP5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 ACTR3BQ9P1U1 418 aa5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 COA3Q9Y2R0 106 aaPredicted RBP5.8□□□□□ -1.48
HMBOX1-208ENST00000521516 RIPK2O43353 540 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 RBM34P42696 430 aaKnown RBP5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 CENPAP49450 140 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 MAGOHP61326 146 aaKnown RBP5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 ESRRGP62508 458 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 BDH1Q02338 343 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 FAM76BQ5HYJ3 339 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 GPR139Q6DWJ6 353 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 CORO6Q6QEF8 472 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 ZBTB49Q6ZSB9 765 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 RPL3LQ92901 407 aaKnown RBP5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 OR4C12Q96R67 309 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 CLEC7AQ9BXN2 247 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 RABEP2Q9H5N1 569 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 BATF3Q9NR55 127 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 CHCHD3Q9NX63 227 aaKnown RBP5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 PRSS37A4D1T9 235 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 SLC22A2O15244 555 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 KHDRBS3O75525 346 aaKnown RBP5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 FAM106CPP0CH98 169 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 RBMY1A1P0DJD3 496 aaKnown RBP5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 GLRA1P23415 457 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 DCTDP32321 178 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 GNALP38405 381 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 TPTEP56180 551 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 RFX4Q33E94 735 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 NANOGP8Q6NSW7 305 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 PGM2L1Q6PCE3 622 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 HAPLN4Q86UW8 402 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 RBM45Q8IUH3 476 aaKnown RBP5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 ZNF561Q8N587 486 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 CD177Q8N6Q3 437 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 OR4D11Q8NGI4 311 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 SPSB4Q96A44 273 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 C1orf21Q9H246 121 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 NDE1Q9NXR1 346 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 POLR1DQ9Y2S0 133 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 SESN1Q9Y6P5 492 aa5.79□□□□□ -1.48
HMBOX1-208ENST00000521516 VPS13BQ7Z7G8 4022 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 TMEM210A6NLX4 147 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 M0R135 149 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 DNAJC8O75937 253 aaPredicted RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 FAM107AO95990 144 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 SHBGP04278 402 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 IGF1P05019 195 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 RPS6KA3P51812 740 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 CDK6Q00534 326 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 TNFRSF9Q07011 255 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 FHL1Q13642 323 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 MESTQ5EB52 335 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 KIRREL3Q8IZU9 778 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 LNX2Q8N448 690 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 ZNF491Q8N8L2 437 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 ZNF799Q96GE5 643 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 TMEM133Q9H2Q1 129 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 OR51J1Q9H342 316 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 SP140LQ9H930 580 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 STUB1Q9UNE7 303 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 VSIG4Q9Y279 399 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 SHISA3A0PJX4 238 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 OR6C68A6NDL8 312 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 LEUTXA8MZ59 168 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 SERPINB7O75635 380 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 CNIH1O95406 144 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 VIMP08670 466 aaKnown RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 OTX1P32242 354 aaPredicted RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 SLURP1P55000 103 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 TNFAIP8L3Q5GJ75 292 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 SLC18B1Q6NT16 456 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 TCF23Q7RTU1 214 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 PATL1Q86TB9 770 aaKnown RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 CATSPERDQ86XM0 798 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 GPR32P1Q8NGA4 272 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 TMEM255BQ8WV15 326 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 UTP4Q969X6 686 aaKnown RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 RNF166Q96A37 237 aaPredicted RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 KCTD12Q96CX2 325 aaKnown RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 MICU1Q9BPX6 476 aa5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 PAIP1Q9H074 479 aaKnown RBP5.78□□□□□ -1.48
HMBOX1-208ENST00000521516 FAT1Q14517 4588 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 LY6LH3BQJ8 138 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 SLC1A7O00341 560 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 SLC16A7O60669 478 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 ANP32DO95626 131 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 IGLV1-47P01700 117 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 ABHD2P08910 425 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 SPARCP09486 303 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 PIPP12273 146 aaPredicted RBP5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 ALDH3A1P30838 453 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 NME5P56597 212 aa5.77□□□□□ -1.49
HMBOX1-208ENST00000521516 PITPNAQ00169 270 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms