RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 ERP29P30040 261 aaKnown RBP5.26□□□□□ -1.57
LSM1-202ENST00000520286 MRPL19P49406 292 aaKnown RBP5.26□□□□□ -1.57
LSM1-202ENST00000520286 ETV1P50549 477 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 RORCP51449 518 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 DEFA1P59665 94 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 DEFA3P59666 94 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ACTA2P62736 377 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ACTG2P63267 376 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ACTC1P68032 377 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ACTA1P68133 377 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 MGAT3Q09327 533 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 MAB21L1Q13394 359 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 DOC2AQ14183 400 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 TFDP2Q14188 446 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 KIAA0087Q14695 138 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 HERPUD1Q15011 391 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ZNF404Q494X3 552 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 COQ5Q5HYK3 327 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 PAGE3Q5JUK9 113 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 SPINK14Q6IE38 97 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 RIMKLAQ8IXN7 391 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 C8orf59Q8N0T1 100 aaPredicted RBP5.26□□□□□ -1.57
LSM1-202ENST00000520286 TMEM61Q8N0U2 210 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 TCAIMQ8N3R3 496 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 C11orf42Q8N5U0 333 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 TMEM35BQ8NCS4 154 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 TTLQ8NG68 377 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 OR4M2Q8NGB6 313 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 OR5B3Q8NH48 314 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ZNF502Q8TBZ5 544 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 LRRC20Q8TCA0 184 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 MARCH1Q8TCQ1 289 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 SLC7A6Q92536 515 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 TMEM54Q969K7 222 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 SGK3Q96BR1 496 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 TMEM101Q96IK0 257 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 MCEEQ96PE7 176 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 SDHCQ99643 169 aaPredicted RBP5.26□□□□□ -1.57
LSM1-202ENST00000520286 RBBP8Q99708 897 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 HOPXQ9BPY8 73 aaPredicted RBP5.26□□□□□ -1.57
LSM1-202ENST00000520286 CCDC32Q9BV29 185 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ABCB10Q9NRK6 738 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 PAQR5Q9NXK6 330 aaPredicted RBP5.26□□□□□ -1.57
LSM1-202ENST00000520286 TAS2R7Q9NYW3 318 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ING4Q9UNL4 249 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ZNF318Q5VUA4 2279 aa5.26□□□□□ -1.57
LSM1-202ENST00000520286 ZFC3H1O60293 1989 aaKnown RBP5.25□□□□□ -1.57
LSM1-202ENST00000520286 IGLV3-10A0A075B6K4 115 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 IGKV1D-13A0A0B4J2D9 117 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 ATP6V1G2-DDX39BF2Z307 99 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 HLA-DRAP01903 254 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 APOA1P02647 267 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 IGKV1-13P0DP09 117 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 PGAM1P18669 254 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 CLDN8P56748 225 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 MYL6P60660 151 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 DYNLT1P63172 113 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 S100A12P80511 92 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 EMX1Q04741 257 aaPredicted RBP5.25□□□□□ -1.57
LSM1-202ENST00000520286 HSDL1Q3SXM5 330 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 NXNL2Q5VZ03 156 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 TBPL2Q6SJ96 375 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 PAGE2Q7Z2X7 111 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 MCFD2Q8NI22 146 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 SPPL2BQ8TCT7 592 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 GTF2H4Q92759 462 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 ISG20Q96AZ6 181 aaKnown RBP5.25□□□□□ -1.57
LSM1-202ENST00000520286 PDXPQ96GD0 296 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 APOL4Q9BPW4 351 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 OR11A1Q9GZK7 315 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 DUSP21Q9H596 190 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 NTN4Q9HB63 628 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 CHRAC1Q9NRG0 131 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 GLTPQ9NZD2 209 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 STOML2Q9UJZ1 356 aa5.25□□□□□ -1.57
LSM1-202ENST00000520286 ZDBF2Q9HCK1 2354 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 TECTAO75443 2155 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 GOLGA8JA6NMD2 632 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 ZNF726A6NNF4 738 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 C5orf67F2Z3F1 127 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 KRTAP4-16G5E9R7 235 aaPredicted RBP5.24□□□□□ -1.57
LSM1-202ENST00000520286 TOR1AO14656 332 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 NOS1APO75052 506 aaPredicted RBP5.24□□□□□ -1.57
LSM1-202ENST00000520286 C1QBP02746 253 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 RBP1P09455 135 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 GIPP09681 153 aaPredicted RBP5.24□□□□□ -1.57
LSM1-202ENST00000520286 GKN3PP0CG01 181 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 HPGDP15428 266 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 HLA-DMAP28067 261 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 OR1G1P47890 313 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 CAV2P51636 162 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 MAP3K7CLP57077 242 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 DNAJB13P59910 316 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 CXCR4P61073 352 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 VBP1P61758 197 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 NCS1P62166 190 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 SLC35A2P78381 396 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 SPANXN3Q5MJ09 141 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 CLVS2Q5SYC1 327 aa5.24□□□□□ -1.57
LSM1-202ENST00000520286 TPRG1LQ5T0D9 272 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms