RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 PRSS37A4D1T9 235 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 H7C1C5 153 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 GNGT2O14610 69 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 TXNDC12O95881 172 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 CLPTM1O96005 669 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 CST1P01037 141 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 NGFP01138 241 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 CD8AP01732 235 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 SERPINA5P05154 406 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF14P17017 642 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 CALCRP30988 508 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 ATP5J2P56134 94 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 FXYD6P3P58550 94 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 LCN6P62502 163 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 PPP1R8Q12972 351 aaKnown RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 KRR1Q13601 381 aaKnown RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 MICAQ29983 383 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 MESTQ5EB52 335 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 FAM27BQ5VT28 67 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 SHEQ5VZ18 495 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF770Q6IQ21 691 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 TMEM53Q6P2H8 277 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 ZNF620Q6ZNG0 422 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 FAM122BQ7Z309 247 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 ADCK1Q86TW2 530 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 MYPOPQ86VE0 399 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 MUC15Q8N387 334 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 LRRC18Q8N456 261 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 THAP8Q8NA92 274 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 AQP11Q8NBQ7 271 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 OR9Q2Q8NGE9 314 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 PHLDA1Q8WV24 401 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 RASD2Q96D21 266 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 LGALS12Q96DT0 336 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 SAMD8Q96LT4 415 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 ERMAPQ96PL5 475 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 OR52D1Q9H346 318 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 MMADHCQ9H3L0 296 aaPredicted RBP5.78□□□□□ -1.48
SDCBP-208ENST00000520228 YY1AP1Q9H869 796 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 NOX3Q9HBY0 568 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 CCNB1IP1Q9NPC3 277 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 CA10Q9NS85 328 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 CBLN4Q9NTU7 201 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 VNN3Q9NY84 501 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 FBXL3Q9UKT7 428 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 HIVEP1P15822 2718 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 MPDZO75970 2070 aa5.78□□□□□ -1.48
SDCBP-208ENST00000520228 ITPR3Q14573 2671 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 MTORP42345 2549 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 IQCMA0A1B0GVH7 501 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 A0A1W2PPK0 400 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 TCRBV3S1A0A5B6 114 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 IMPA2O14732 288 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 ARPC3O15145 178 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 IDH3BO43837 385 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 SLC16A7O60669 478 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 FKBP6O75344 327 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 E2F6O75461 281 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 KHDRBS3O75525 346 aaKnown RBP5.77□□□□□ -1.49
SDCBP-208ENST00000520228 PTHP01270 115 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 CSN3P07498 182 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 OR4A8P0C604 315 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 IGHV4-31P0DP07 118 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 ZNF35P13682 527 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 CTLA4P16410 223 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 GSTM3P21266 225 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 CA6P23280 308 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 LAP3P28838 519 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 ERFP50548 548 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 PCBD1P61457 104 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 GNB1P62873 340 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 GALK2Q01415 458 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 HSF2Q03933 536 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 GK3PQ14409 553 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 CLEC12AQ5QGZ9 265 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 C1orf146Q5VVC0 180 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 RPL13AP3Q6NVV1 102 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 CCDC121Q6ZUS5 278 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 TGIF2LYQ8IUE0 185 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 ZNF584Q8IVC4 421 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 SLC30A7Q8NEW0 376 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 WFDC11Q8NEX6 87 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 Q8NFD4 153 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 NUP37Q8NFH4 326 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 OR10G2Q8NGC3 310 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 OR52L1Q8NGH7 329 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 OR4K13Q8NH42 304 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 GIPC3Q8TF64 312 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 NABP1Q96AH0 204 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 FBXO17Q96EF6 278 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 ZNF75AQ96N20 296 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 DUX3Q96PT4 197 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 DGCR6LQ9BY27 220 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 SYT4Q9H2B2 425 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 C1orf198Q9H425 327 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 RERGLQ9H628 205 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 EGLN3Q9H6Z9 239 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 ZNF696Q9H7X3 374 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 TIMM10BQ9Y5J6 103 aa5.77□□□□□ -1.49
SDCBP-208ENST00000520228 CDH10Q9Y6N8 788 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms