RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 UBE2UQ5VVX9 321 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 ZNF573Q86YE8 665 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 PARP16Q8N5Y8 322 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 OR13C5Q8NGS8 318 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 OR13C9Q8NGT0 318 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 TRMT10AQ8TBZ6 339 aaKnown RBP12.72□□□□□ -0.37
PDCD6-211ENST00000515587 NPRL2Q8WTW4 380 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 TMEM106AQ96A25 262 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 BORCS8Q96FH0 119 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 OPALINQ96PE5 141 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 TMED9Q9BVK6 235 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 ZNF696Q9H7X3 374 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 RNF7Q9UBF6 113 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 NBEAL1Q6ZS30 2694 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 COL6A5A8TX70 2615 aa12.72□□□□□ -0.37
PDCD6-211ENST00000515587 PQLC2LA1A4F0 135 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 ZNF879B4DU55 563 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 TMEM178BH3BS89 294 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 RAB3AP20336 220 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 ATP1B3P54709 279 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 FAM76BQ5HYJ3 339 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 DMRTC1Q5HYR2 192 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 WDR86Q86TI4 376 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 SCCPDHQ8NBX0 429 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 DNAAF1Q8NEP3 725 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 RPL3LQ92901 407 aaKnown RBP12.71□□□□□ -0.37
PDCD6-211ENST00000515587 SPSB1Q96BD6 273 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 CPNE2Q96FN4 548 aaPredicted RBP12.71□□□□□ -0.37
PDCD6-211ENST00000515587 OR14A2Q96R54 314 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 BPESC1Q9GZL8 116 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 TLNRD1Q9H1K6 362 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 NPTNQ9Y639 398 aa12.71□□□□□ -0.37
PDCD6-211ENST00000515587 VPS13CQ709C8 3753 aa12.71□□□□□ -0.38
PDCD6-211ENST00000515587 ISPDA4D126 451 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 TRIM64BA6NI03 449 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 VWC2LB2RUY7 222 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 CDIPTO14735 213 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 SULT1B1O43704 296 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 CYB5R3P00387 301 aaPredicted RBP12.7□□□□□ -0.38
PDCD6-211ENST00000515587 HCKP08631 526 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 PCMT1P22061 227 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 AZGP1P25311 298 aaKnown RBP12.7□□□□□ -0.38
PDCD6-211ENST00000515587 HAAOP46952 286 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 RBP2P50120 134 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 RPS11P62280 158 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDCD6-211ENST00000515587 NEDD8Q15843 81 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 ACSM3Q53FZ2 586 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 LHFPL2Q6ZUX7 228 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 BIVMQ86UB2 503 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 PHC2Q8IXK0 858 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 BOLLQ8N9W6 283 aaKnown RBP12.7□□□□□ -0.38
PDCD6-211ENST00000515587 ZNF671Q8TAW3 534 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 REG4Q9BYZ8 158 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 FGF23Q9GZV9 251 aaPredicted RBP12.7□□□□□ -0.38
PDCD6-211ENST00000515587 OR51I2Q9H344 312 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 TAS2R4Q9NYW5 299 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 POLDIP2Q9Y2S7 368 aa12.7□□□□□ -0.38
PDCD6-211ENST00000515587 NSD1Q96L73 2696 aaPredicted RBP12.7□□□□□ -0.38
PDCD6-211ENST00000515587 RNF223E7ERA6 249 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 J3QT63 122 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 CCRL2O00421 344 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 ALX3O95076 343 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 CYB5AP00167 134 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 HEXAP06865 529 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
PDCD6-211ENST00000515587 GABRA5P31644 462 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 PMELP40967 661 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 MTCP1P56278 107 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 BTG1P62324 171 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 AVPI1Q5T686 147 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 HAGHLQ6PII5 290 aaPredicted RBP12.69□□□□□ -0.38
PDCD6-211ENST00000515587 ZNF826PQ6ZT77 177 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 MUC20Q8N307 709 aaPredicted RBP12.69□□□□□ -0.38
PDCD6-211ENST00000515587 OR10Z1Q8NGY1 313 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 LRRC29Q8WV35 223 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 TMEM203Q969S6 136 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 DERL3Q96Q80 235 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 DCAF16Q9NXF7 216 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 WIPI2Q9Y4P8 454 aa12.69□□□□□ -0.38
PDCD6-211ENST00000515587 PPIAL4EA0A075B759 164 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 TRBV5-7A0A0A0MS05 114 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 IGKV1-9A0A0C4DH69 117 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 PPIAL4DF5H284 164 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 RGS9O75916 674 aaPredicted RBP12.68□□□□□ -0.38
PDCD6-211ENST00000515587 INMTO95050 263 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 PPIAL4FP0DN26 164 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 CFHR2P36980 270 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 TGFBR2P37173 567 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 RPS25P62851 125 aaKnown RBP12.68□□□□□ -0.38
PDCD6-211ENST00000515587 KCNJ8Q15842 424 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 WDR82Q6UXN9 313 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 CEACAM19Q7Z692 300 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 C11orf53Q8IXP5 236 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 AQP3Q92482 292 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 PKIBQ9C010 78 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 SLITRK2Q9H156 845 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 TMEM138Q9NPI0 162 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 NDUFB11Q9NX14 153 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 PPIAL4AQ9Y536 164 aa12.68□□□□□ -0.38
PDCD6-211ENST00000515587 A0A1W2PPK0 400 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms