RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 FAM230AA0A1W2PPH8 454 aa10□□□□□ -0.81
SNF8-215ENST00000515572 PPIAL4DF5H284 164 aa10□□□□□ -0.81
SNF8-215ENST00000515572 J3QT63 122 aa10□□□□□ -0.81
SNF8-215ENST00000515572 SMAD7O15105 426 aaKnown RBP10□□□□□ -0.81
SNF8-215ENST00000515572 SULT1B1O43704 296 aa10□□□□□ -0.81
SNF8-215ENST00000515572 LHBP01229 141 aa10□□□□□ -0.81
SNF8-215ENST00000515572 HSMCR30P0CW71 290 aa10□□□□□ -0.81
SNF8-215ENST00000515572 PPIAL4FP0DN26 164 aa10□□□□□ -0.81
SNF8-215ENST00000515572 CPEP16870 476 aa10□□□□□ -0.81
SNF8-215ENST00000515572 AZGP1P25311 298 aaKnown RBP10□□□□□ -0.81
SNF8-215ENST00000515572 MAPK3P27361 379 aaPredicted RBP10□□□□□ -0.81
SNF8-215ENST00000515572 MAP2K4P45985 399 aa10□□□□□ -0.81
SNF8-215ENST00000515572 HAAOP46952 286 aa10□□□□□ -0.81
SNF8-215ENST00000515572 SOX2P48431 317 aa10□□□□□ -0.81
SNF8-215ENST00000515572 ATP1B3P54709 279 aa10□□□□□ -0.81
SNF8-215ENST00000515572 EMX1Q04741 257 aaPredicted RBP10□□□□□ -0.81
SNF8-215ENST00000515572 TPBGQ13641 420 aa10□□□□□ -0.81
SNF8-215ENST00000515572 DOC2BQ14184 412 aa10□□□□□ -0.81
SNF8-215ENST00000515572 ZMYND11Q15326 602 aa10□□□□□ -0.81
SNF8-215ENST00000515572 TRAM1Q15629 374 aa10□□□□□ -0.81
SNF8-215ENST00000515572 HAGHLQ6PII5 290 aaPredicted RBP10□□□□□ -0.81
SNF8-215ENST00000515572 LHFPL2Q6ZUX7 228 aa10□□□□□ -0.81
SNF8-215ENST00000515572 BIVMQ86UB2 503 aa10□□□□□ -0.81
SNF8-215ENST00000515572 SPARTQ8N0X7 666 aa10□□□□□ -0.81
SNF8-215ENST00000515572 GCSAMQ8N6F7 178 aa10□□□□□ -0.81
SNF8-215ENST00000515572 CLDND2Q8NHS1 167 aa10□□□□□ -0.81
SNF8-215ENST00000515572 LRRC29Q8WV35 223 aa10□□□□□ -0.81
SNF8-215ENST00000515572 AQP3Q92482 292 aa10□□□□□ -0.81
SNF8-215ENST00000515572 RPL3LQ92901 407 aaKnown RBP10□□□□□ -0.81
SNF8-215ENST00000515572 TMEM106AQ96A25 262 aa10□□□□□ -0.81
SNF8-215ENST00000515572 RAB39BQ96DA2 213 aa10□□□□□ -0.81
SNF8-215ENST00000515572 BORCS8Q96FH0 119 aa10□□□□□ -0.81
SNF8-215ENST00000515572 CPNE2Q96FN4 548 aaPredicted RBP10□□□□□ -0.81
SNF8-215ENST00000515572 MGLLQ99685 303 aa10□□□□□ -0.81
SNF8-215ENST00000515572 GAL3ST1Q99999 423 aa10□□□□□ -0.81
SNF8-215ENST00000515572 PKIBQ9C010 78 aa10□□□□□ -0.81
SNF8-215ENST00000515572 CKLFQ9UBR5 152 aa10□□□□□ -0.81
SNF8-215ENST00000515572 PPIAL4AQ9Y536 164 aa10□□□□□ -0.81
SNF8-215ENST00000515572 MED13LQ71F56 2210 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 TRAV38-1A0A0B4J264 116 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 IGKV1-9A0A0C4DH69 117 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 ZNF879B4DU55 563 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 LGALS8O00214 317 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 TNFAIP8O95379 198 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 MUC1P15941 1255 aaPredicted RBP9.99□□□□□ -0.81
SNF8-215ENST00000515572 RAB3AP20336 220 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 MPZP25189 248 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 PSMA1P25786 263 aaKnown RBP9.99□□□□□ -0.81
SNF8-215ENST00000515572 GZMKP49863 264 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 RBP2P50120 134 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 MTCP1P56278 107 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 RPS11P62280 158 aaKnown RBP eCLIP9.99□□□□□ -0.81
SNF8-215ENST00000515572 IL24Q13007 206 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 TMEM249Q2WGJ8 235 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 ZNF404Q494X3 552 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 DMRTC1Q5HYR2 192 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 TEX36Q5VZQ5 186 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 ZNF529Q6P280 563 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 MAPK1IP1LQ8NDC0 245 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 OR13C5Q8NGS8 318 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 OR13C9Q8NGT0 318 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 TRMT10AQ8TBZ6 339 aaKnown RBP9.99□□□□□ -0.81
SNF8-215ENST00000515572 NPRL2Q8WTW4 380 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 OPALINQ96PE5 141 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 OR14A2Q96R54 314 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 NARFLQ9H6Q4 476 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 ZNF665Q9H7R5 613 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 PCDHB10Q9UN67 800 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 CELSR1Q9NYQ6 3014 aa9.99□□□□□ -0.81
SNF8-215ENST00000515572 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 OOEPA6NGQ2 149 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 SRRM5B3KS81 715 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 WNT9BO14905 357 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 MAGEB3O15480 346 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 NDUFA2O43678 99 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 NOS1APO75052 506 aaPredicted RBP9.98□□□□□ -0.81
SNF8-215ENST00000515572 GPX5O75715 221 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 RHBDL1O75783 438 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 HCKP08631 526 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 ACAA1P09110 424 aaPredicted RBP9.98□□□□□ -0.81
SNF8-215ENST00000515572 FSTP19883 344 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 LMO4P61968 165 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 PPP3R1P63098 170 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 HNRNPA0Q13151 305 aaKnown RBP9.98□□□□□ -0.81
SNF8-215ENST00000515572 UBE2UQ5VVX9 321 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 LIPKQ5VXJ0 399 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 DCDC5Q6ZRR9 648 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 PHC2Q8IXK0 858 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 BOLLQ8N9W6 283 aaKnown RBP9.98□□□□□ -0.81
SNF8-215ENST00000515572 POC1AQ8NBT0 407 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 C12orf43Q96C57 262 aaKnown RBP9.98□□□□□ -0.81
SNF8-215ENST00000515572 C1orf159Q96HA4 380 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 TMED9Q9BVK6 235 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 METTL17Q9H7H0 456 aaPredicted RBP9.98□□□□□ -0.81
SNF8-215ENST00000515572 TMEM165Q9HC07 324 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 TMEM138Q9NPI0 162 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 RASL12Q9NYN1 266 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 TAS2R4Q9NYW5 299 aa9.98□□□□□ -0.81
SNF8-215ENST00000515572 IGKV1-27A0A075B6S5 117 aa9.97□□□□□ -0.81
SNF8-215ENST00000515572 TRBV5-7A0A0A0MS05 114 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms