RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 OR2L13Q8N349 312 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 NATD1Q8N6N6 113 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 C14orf178Q8N769 122 aaPredicted RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 C15orf54Q8N8G6 183 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 OR2M3Q8NG83 312 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 OSTF1Q92882 214 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 RAB8BQ92930 207 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 SLC25A38Q96DW6 304 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 SLC35G5Q96KT7 338 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 OR52E6Q96RD3 313 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 CCT7Q99832 543 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 NICN1Q9BSH3 213 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TMEM109Q9BVC6 243 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 OR51I1Q9H343 314 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 Q9H3A6 140 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 PIGUQ9H490 435 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 WDR55Q9H6Y2 383 aaPredicted RBP3.12□□□□□ -1.91
HTT-210ENST00000512909 TMEM185BQ9H7F4 350 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 CALHM2Q9HA72 323 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 SH2D2AQ9NP31 389 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 UBQLN4Q9NRR5 601 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 EXD2Q9NVH0 621 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 VNN3Q9NY84 501 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 TAS2R7Q9NYW3 318 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 OR1A1Q9P1Q5 309 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 CLEC4AQ9UMR7 237 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 FAM215AQ9Y5M1 114 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 WIF1Q9Y5W5 379 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 KCNE3Q9Y6H6 103 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 BPTFQ12830 3046 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 AHCTF1Q8WYP5 2266 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 ZZEF1O43149 2961 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 PIEZO2Q9H5I5 2752 aa3.12□□□□□ -1.91
HTT-210ENST00000512909 SCN2AQ99250 2005 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 HELTA6NFD8 242 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SLC22A20A6NK97 555 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 PCP4L1A6NKN8 68 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 H0YC42 278 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 ANGPT2O15123 496 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 UBDO15205 165 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 CXCL13O43927 109 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 FADS1O60427 444 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SCN2BO60939 215 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 GPX5O75715 221 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SCGNO76038 276 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 RCBTB2O95199 551 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 OXSR1O95747 527 aaPredicted RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 TGM6O95932 706 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 CSTAP01040 98 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 IGKV1D-16P01601 117 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 KRT16P08779 473 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 H2BFMP0C1H6 154 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 OR8U8P0C7N1 319 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 UBTFL6P0CB48 400 aaPredicted RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 POU2F1P14859 743 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 CPN1P15169 458 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 NCF2P19878 526 aaPredicted RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 TBXA2RP21731 343 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 ZP3P21754 424 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 UQCRC2P22695 453 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 GABRR1P24046 479 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 CALRP27797 417 aaKnown RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 PTGDSP41222 190 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 CRATP43155 626 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SUCLG1P53597 346 aaKnown RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 LYZP61626 148 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 PSPHP78330 225 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 HPCAP84074 193 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 BST1Q10588 318 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 ARFRP1Q13795 201 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 CAPRIN1Q14444 709 aaKnown RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 CASP8Q14790 479 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 PON3Q15166 354 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 NDUFAF6Q330K2 333 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 LINC01620Q4KN68 170 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 OR2A2Q6IF42 318 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 UTS2BQ765I0 119 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 TRPM8Q7Z2W7 1104 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 TPRA1Q86W33 373 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 UBE2J2Q8N2K1 259 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 MREGQ8N565 214 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 TRIML2Q8N7C3 387 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SYT14Q8NB59 555 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 OR5D16Q8NGK9 328 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 ZNF75CPQ92670 426 aaPredicted RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 NRGNQ92686 78 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 RNASE6Q93091 150 aaKnown RBP3.11□□□□□ -1.91
HTT-210ENST00000512909 C4orf36Q96KX1 117 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 C7orf34Q96L11 122 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 RNF145Q96MT1 663 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 MS4A4EQ96PG1 132 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 OR7D2Q96RA2 312 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 PANX1Q96RD7 426 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SLC6A7Q99884 636 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SLC39A3Q9BRY0 314 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 SLC35A5Q9BS91 424 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 MED18Q9BUE0 208 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 C19orf24Q9BVV8 132 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 C20orf27Q9GZN8 174 aa3.11□□□□□ -1.91
HTT-210ENST00000512909 NMUR2Q9GZQ4 415 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms