RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 FBXL7Q9UJT9 491 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 VPREB3Q9UKI3 123 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 ARL2BPQ9Y2Y0 163 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 RHBDD3Q9Y3P4 386 aa5.9□□□□□ -1.46
USP46-208ENST00000512656 SAMHD1Q9Y3Z3 626 aaKnown RBP5.9□□□□□ -1.46
USP46-208ENST00000512656 A0A1W2PQ09 198 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 MEIOCA2RUB1 952 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ANKRD61A6NGH8 418 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 H3BN98 237 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.89□□□□□ -1.47
USP46-208ENST00000512656 M0R1W7 72 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ACOT8O14734 319 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 NPFFO15130 113 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 SOX14O95416 240 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 CST4P01036 141 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 LYNP07948 512 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 CLUP10909 449 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 PSKH1P11801 424 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 POU1F1P28069 291 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 OPRL1P41146 370 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 UBE2E1P51965 193 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 PROK1P58294 105 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 CSNK2BP67870 215 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ACSM1Q08AH1 577 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 C2orf68Q2NKX9 166 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 LINC01590Q5TEZ4 76 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 STUMQ69YW2 141 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ASPHD2Q6ICH7 369 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 C11orf88Q6PI97 169 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 KCTD8Q6ZWB6 473 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 WDR86Q86TI4 376 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 DHFR2Q86XF0 187 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 TIGD4Q8IY51 512 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 FAM216BQ8N7L0 139 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 C8orf46Q8TAG6 207 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 FAM81AQ8TBF8 368 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 THEM6Q8WUY1 208 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 RAB3IPQ96QF0 476 aaPredicted RBP5.89□□□□□ -1.47
USP46-208ENST00000512656 RBM4BQ9BQ04 359 aaKnown RBP5.89□□□□□ -1.47
USP46-208ENST00000512656 TEX12Q9BXU0 123 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 FAM234AQ9H0X4 552 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 OR51V1Q9H2C8 321 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 CDIP1Q9H305 208 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 METTL8Q9H825 291 aaKnown RBP5.89□□□□□ -1.47
USP46-208ENST00000512656 SIRT7Q9NRC8 400 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ARL8BQ9NVJ2 186 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ARMC1Q9NVT9 282 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 ZNRD1Q9P1U0 126 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 U3KQV3 271 aa5.89□□□□□ -1.47
USP46-208ENST00000512656 TRBV23-1A0A0A0MS06 115 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 A0A0G2JK05 382 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ZNF816-ZNF321PA0A0X1KG74 233 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 A0A1W2PPH5 198 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ARRDC5A6NEK1 342 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ACOD1A6NK06 481 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 FAM183AA6NL82 134 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ZNF850A8MQ14 1090 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 B2RBV5 119 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 PRR23D1E9PI22 279 aaPredicted RBP5.88□□□□□ -1.47
USP46-208ENST00000512656 RNASEK-C17orf49H0YIS7 233 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 SIGLEC5O15389 551 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 PRODHO43272 600 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 AKR7A2O43488 359 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 FCN3O75636 299 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 TSPAN9O75954 239 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 HMGN1P05114 100 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 PRR23D2P0DMB1 279 aaPredicted RBP5.88□□□□□ -1.47
USP46-208ENST00000512656 RAP2AP10114 183 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 HOXB6P17509 224 aaKnown RBP5.88□□□□□ -1.47
USP46-208ENST00000512656 NDUFB7P17568 137 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ATP6V1B2P21281 511 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ANOS1P23352 680 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 SAA4P35542 130 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 CAV3P56539 151 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 GMFBP60983 142 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 PPP1R8Q12972 351 aaKnown RBP5.88□□□□□ -1.47
USP46-208ENST00000512656 PRDX4Q13162 271 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 TRIM25Q14258 630 aaKnown RBP5.88□□□□□ -1.47
USP46-208ENST00000512656 LCN8Q6JVE9 175 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ZNF788Q6ZQV5 615 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 Q6ZSV7 163 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 PRSS45Q7RTY3 260 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ZDHHC23Q8IYP9 409 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 OR10G2Q8NGC3 310 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 OR5T2Q8NGG2 359 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 OR5D13Q8NGL4 314 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 OTOSQ8NHW6 89 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ANGPTL6Q8NI99 470 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ZNF671Q8TAW3 534 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 GIPC3Q8TF64 312 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 OR5P3Q8WZ94 311 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 PIGCQ92535 297 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 RPL3LQ92901 407 aaKnown RBP5.88□□□□□ -1.47
USP46-208ENST00000512656 RNF170Q96K19 258 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 LRGUKQ96M69 825 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 PKP2Q99959 881 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 MED20Q9H944 212 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 ZNF556Q9HAH1 456 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 RAB18Q9NP72 206 aa5.88□□□□□ -1.47
USP46-208ENST00000512656 NLKQ9UBE8 527 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms