RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 NGBQ9NPG2 151 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 COQ3Q9NZJ6 369 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 SH3BGRL2Q9UJC5 107 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 ING4Q9UNL4 249 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CACNG2Q9Y698 323 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 INTS1Q8N201 2190 aaKnown RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 IGF2RP11717 2491 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 IGKV1-27A0A075B6S5 117 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 ORC5O43913 435 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CSF1P09603 554 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CD3GP09693 182 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 MADCAM1Q13477 382 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 KLF9Q13886 244 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 ZNF260Q3ZCT1 412 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 OR10K2Q6IF99 312 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 MTFR2Q6P444 385 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 TMEM108Q6UXF1 575 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 CCBE1Q6UXH8 406 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 NRARPQ7Z6K4 114 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 BIVMQ86UB2 503 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 MKXQ8IYA7 352 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 TMEM104Q8NE00 496 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 OR5D18Q8NGL1 313 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 HPSE2Q8WWQ2 592 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 NKX3-1Q99801 234 aaPredicted RBP13.05□□□□□ -0.32
SCLT1-209ENST00000511426 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 RTL8AQ9BWD3 113 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 PKIBQ9C010 78 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 KCNK15Q9H427 330 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 GPR160Q9UJ42 338 aa13.05□□□□□ -0.32
SCLT1-209ENST00000511426 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.04□□□□□ -0.32
SCLT1-209ENST00000511426 ANKRD20A5PA0PJZ0 165 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A10PA6NDY2 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A18PA6NE21 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A16PA6NEW6 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A20PA6NIJ5 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A8PA6NJQ4 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A7PA6NKC0 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 TMEM210A6NLX4 147 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A22PA8MWA6 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A12PA8MX19 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A5PA8MXJ8 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A23PA8MXZ1 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A15PP0C7V4 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A13PP0C7W8 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A14PP0C7W9 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 FAM90A24PP0C7X0 464 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 PTAFRP25105 342 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 GCH1P30793 250 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 CCKARP32238 428 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 GLRXP35754 106 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 RFX2P48378 723 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 MZT1Q08AG7 82 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 ELP2Q6IA86 826 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 OR2T2Q6IF00 324 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 LIX1LQ8IVB5 337 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 DTX3Q8N9I9 347 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 GAL3ST1Q99999 423 aa13.04□□□□□ -0.32
SCLT1-209ENST00000511426 A0A1B0GVG6 124 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 FAM240BA0A1B0GVZ2 78 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 A0A1B0GWJ7 208 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 SERPINE3A8MV23 424 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 LANCL1O43813 399 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 HIST1H1DP16402 221 aaKnown RBP13.03□□□□□ -0.32
SCLT1-209ENST00000511426 SLC6A1P30531 599 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 VEGFCP49767 419 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 PSG7Q13046 419 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 LY6DQ14210 128 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 FAM76BQ5HYJ3 339 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 NHLRC3Q5JS37 347 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 RGS7BPQ6MZT1 257 aaPredicted RBP13.03□□□□□ -0.32
SCLT1-209ENST00000511426 PLET1Q6UQ28 207 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 Q6ZTK2 550 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 RNF144BQ7Z419 303 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 C1QL2Q7Z5L3 287 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 ZNF611Q8N823 705 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 ACBD4Q8NC06 268 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 OR8G5Q8NG78 346 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 RAB3CQ96E17 227 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 Q96M66 194 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 C1QTNF6Q9BXI9 259 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 PLK3Q9H4B4 646 aa13.03□□□□□ -0.32
SCLT1-209ENST00000511426 ELL3Q9HB65 397 aaPredicted RBP13.03□□□□□ -0.32
SCLT1-209ENST00000511426 PURGQ9UJV8 347 aaKnown RBP13.03□□□□□ -0.32
SCLT1-209ENST00000511426 A0A1B0GUH1 482 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 M0R1B8 84 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 CCL21O00585 134 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 SERPINA2P20848 420 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 MPZP25189 248 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 CALCRP30988 508 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 CBX5P45973 191 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 ZNF83P51522 516 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 PRSS12P56730 875 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 IL24Q13007 206 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 SNTB2Q13425 540 aaKnown RBP13.02□□□□□ -0.32
SCLT1-209ENST00000511426 SPATA46Q5T0L3 261 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 OLFML2AQ68BL7 652 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 PCSK4Q6UW60 755 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 OSR2Q8N2R0 312 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 NUP37Q8NFH4 326 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms