RNA–Protein interactions for RNA: ENST00000511124.1

CLOCK-209, Transcript of clock circadian regulator, humanhuman

TSL 1 (best)

Gene CLOCK, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-209ENST00000511124 KIAA0040Q15053 153 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CCDC92Q53HC0 331 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF385BQ569K4 471 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 PAN3Q58A45 887 aaKnown RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 SLC25A30Q5SVS4 291 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 SPATA46Q5T0L3 261 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 LCN12Q6JVE5 192 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 METAP1DQ6UB28 335 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CCDC121Q6ZUS5 278 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 AHSA2Q719I0 299 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 RNASE11Q8TAA1 199 aaKnown RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 SLAMF6Q96DU3 332 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 C1orf159Q96HA4 380 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 CEP19Q96LK0 163 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 PDCD10Q9BUL8 212 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 NMNAT1Q9HAN9 279 aaPredicted RBP2.4□□□□□ -2.03
CLOCK-209ENST00000511124 LIN7BQ9HAP6 207 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 MSL2Q9HCI7 577 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 KAAG1Q9UBP8 84 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 HAO1Q9UJM8 370 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 STUB1Q9UNE7 303 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 SMAD5-AS1Q9Y6J3 95 aa2.4□□□□□ -2.03
CLOCK-209ENST00000511124 A0A1W2PRQ8 180 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 DAPL1A0PJW8 107 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF593O00488 134 aaPredicted RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 HOXA3O43365 443 aaPredicted RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PGA4P0DJD7 388 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PGA3P0DJD8 388 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PGA5P0DJD9 388 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 CA6P23280 308 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 BLVRBP30043 206 aaPredicted RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 CCKARP32238 428 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ACAA2P42765 397 aaKnown RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 GPR4P46093 362 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 SERPINB10P48595 397 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 MTPNP58546 118 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 LCN6P62502 163 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PSG4Q00888 419 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 HGFACQ04756 655 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 KLF10Q13118 480 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 DGCR6Q14129 220 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF273Q14593 569 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 TRAM1Q15629 374 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 FAM106AQ4KMX7 169 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ZFP1Q6P2D0 407 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 CFAP161Q6P656 301 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 EPGNQ6UW88 154 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 DNM1P46Q6ZS02 220 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 TRPM8Q7Z2W7 1104 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 RIMKLAQ8IXN7 391 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 KDM8Q8N371 416 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 OR4K13Q8NH42 304 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 VSTM2AQ8TAG5 236 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 GTF2H4Q92759 462 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PHB2Q99623 299 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 MFFQ9GZY8 342 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 OR52D1Q9H346 318 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 SLA2Q9H6Q3 261 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ACTR3BQ9P1U1 418 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 RPUSD1Q9UJJ7 312 aaKnown RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ALPK2Q86TB3 2170 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 WDFY3Q8IZQ1 3526 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 C4orf51C9J302 202 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 H0YHG0 523 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ZNHIT1O43257 154 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 EDF1O60869 148 aaKnown RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 IGKV1D-16P01601 117 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 CELA3BP08861 270 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 CTXN2P0C2S0 81 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 RAP2AP10114 183 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 LYL1P12980 280 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 COX4I1P13073 169 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 RAB3AP20336 220 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 COL8A2P25067 703 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 CDKN2CP42773 168 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 MTNR1BP49286 362 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PSMA6P60900 246 aaKnown RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 MRPS25P82663 173 aaKnown RBP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 TIAL1Q01085 375 aaKnown RBP eCLIP2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PAX8Q06710 450 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 PRDX4Q13162 271 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 GRK1Q15835 563 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 NXNL2Q5VZ03 156 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 OR2T5Q6IEZ7 315 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ZNF529Q6P280 563 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 ANGPTL5Q86XS5 388 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 TMEM123Q8N131 208 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 KLHDC1Q8N7A1 406 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 BHLHE23Q8NDY6 225 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 OR10G2Q8NGC3 310 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 OR2T29Q8NH02 315 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 C10orf82Q8WW14 230 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 NEUROG1Q92886 237 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 NRBF2Q96F24 287 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 AJUBAQ96IF1 538 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 HSH2DQ96JZ2 352 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 POM121L2Q96KW2 1035 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 SYT4Q9H2B2 425 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 SEMA6AQ9H2E6 1030 aa2.39□□□□□ -2.03
CLOCK-209ENST00000511124 C16orf95Q9H693 158 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms