RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 MXD1Q05195 221 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 BAXQ07812 192 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 PUDPQ08623 228 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 FASTKQ14296 549 aaKnown RBP3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 ARHGAP11BQ3KRB8 267 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 PYCR3Q53H96 274 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 TMEM215Q68D42 235 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 KCTD16Q68DU8 428 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 SFXN4Q6P4A7 337 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 BAIAP2L2Q6UXY1 529 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 HOGA1Q86XE5 327 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 APLFQ8IW19 511 aaPredicted RBP3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 SKA3Q8IX90 412 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 LRRC18Q8N456 261 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 STX19Q8N4C7 294 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 FTMTQ8N4E7 242 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 OR52E4Q8NGH9 312 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 OR10G9Q8NGN4 311 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 RNASE11Q8TAA1 199 aaKnown RBP3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 SPPL2BQ8TCT7 592 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 SDR42E1Q8WUS8 393 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 ZNF486Q96H40 463 aaPredicted RBP3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 PSMB7Q99436 277 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 KCNJ16Q9NPI9 418 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 MIEF1Q9NQG6 463 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 EXOSC3Q9NQT5 275 aaKnown RBP3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 THYN1Q9P016 225 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 ZNF257Q9Y2Q1 563 aa3.42□□□□□ -1.86
SMARCA5-202ENST00000508573 ERCC6Q03468 1493 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 A0A1W2PP64 1363 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 IGLV5-37A0A075B6J1 123 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 IGHV3-20A0A0C4DH32 117 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 A0A1B0GV90 55 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 VPS37CA5D8V6 355 aaPredicted RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 FAM159BA6NKW6 160 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 PPP5D1E7EU14 171 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 E9PLD3 99 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 GPR31O00270 319 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 KPNA4O00629 521 aaPredicted RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 CDX4O14627 284 aaPredicted RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 PHYHO14832 338 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 SUPT3HO75486 399 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 GPR75O95800 540 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 TTC4O95801 387 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 IFNA1P01562 189 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 APOC1P02654 83 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 GIPP09681 153 aaPredicted RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 TSPOP30536 169 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 GPR6P46095 362 aaPredicted RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 REG1BP48304 166 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 RFX2P48378 723 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 SRP9P49458 86 aaKnown RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 LMO4P61968 165 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 ESRRGP62508 458 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 Q0VFX4 171 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 GAGE5Q13069 117 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 GAGE6Q13070 117 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 TSNQ15631 228 aaKnown RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 TRMT12Q53H54 448 aaKnown RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 ACSBG2Q5FVE4 666 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 KLF17Q5JT82 389 aaPredicted RBP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 Q6ZN92 141 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 RASSF6Q6ZTQ3 369 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 FAM220AQ7Z4H9 259 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 OR1L8Q8NGR8 309 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 OR1P1Q8NH06 330 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 OR51Q1Q8NH59 317 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 OR10A6Q8NH74 314 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 C11orf40Q8WZ69 217 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 RDH5Q92781 318 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 UCN3Q969E3 161 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 C11orf52Q96A22 123 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 ZHX1-C8orf76Q96EF9 292 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 PIK3IP1Q96FE7 263 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 RNF126Q9BV68 326 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 TMED9Q9BVK6 235 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 TAPBPLQ9BX59 468 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 OR11A1Q9GZK7 315 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 ABCG5Q9H222 651 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 FBXL15Q9H469 300 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 VSIRQ9H7M9 311 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 FKRPQ9H9S5 495 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 SLC7A10Q9NS82 523 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 RBM22Q9NW64 420 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 OCIAD1Q9NX40 245 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 COMMD9Q9P000 198 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 OR1A1Q9P1Q5 309 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 SPRR3Q9UBC9 169 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 VAX2Q9UIW0 290 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 ANXA10Q9UJ72 324 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 DKKL1Q9UK85 242 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 POU2F3Q9UKI9 436 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 ASB4Q9Y574 426 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 CCDC171Q6TFL3 1326 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 NRCAMQ92823 1304 aa3.41□□□□□ -1.86
SMARCA5-202ENST00000508573 TAF1LQ8IZX4 1826 aa3.4□□□□□ -1.86
SMARCA5-202ENST00000508573 IGKV1D-13A0A0B4J2D9 117 aa3.4□□□□□ -1.87
SMARCA5-202ENST00000508573 A0A0G2JRQ6 117 aa3.4□□□□□ -1.87
SMARCA5-202ENST00000508573 BTNL10A8MVZ5 291 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms