RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 S100A14Q9HCY8 104 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 ABCB9Q9NP78 766 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 ACTR3BQ9P1U1 418 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 NLKQ9UBE8 527 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 NKX1-2Q9UD57 310 aaPredicted RBP7.56□□□□□ -1.2
NEDD9-211ENST00000508546 RHBDD3Q9Y3P4 386 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 MPC1Q9Y5U8 109 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 COMMD3-BMI1R4GMX3 469 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 CSMD3Q7Z407 3707 aa7.56□□□□□ -1.2
NEDD9-211ENST00000508546 IGKV1D-17A0A075B6S4 117 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 hCG_1809904A0A1W2PP81 198 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 A0A1W2PPE2 198 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 A0A1W2PPH5 198 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 A0A1W2PR64 198 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 A0A1W2PRV1 198 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TCRBV3S1A0A5B6 114 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 AQP12BA6NM10 295 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 H3BNX3 289 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TBX1O43435 398 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 SYNGR1O43759 233 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 GMNNO75496 209 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 SERPINA1P01009 418 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 PSG2P11465 335 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 DCTDP32321 178 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 PYCR1P32322 319 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 SLC15A1P46059 708 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 GABRA2P47869 451 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 GSK3AP49840 483 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 DYNLT3P51808 116 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 SLC25A1P53007 311 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 GRB2P62993 217 aaKnown RBP7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TAF13Q15543 124 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TEX30Q5JUR7 227 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 Q6ZS46 218 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 PRSS45Q7RTY3 260 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 LHFPL4Q7Z7J7 247 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TMEM219Q86XT9 240 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 AQP12AQ8IXF9 295 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 DYNAPQ8N1N2 210 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 ZNRF1Q8ND25 227 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TMEM185AQ8NFB2 350 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 OR52H1Q8NGJ2 320 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 OR2T4Q8NH00 348 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 RPL3LQ92901 407 aaKnown RBP7.55□□□□□ -1.2
NEDD9-211ENST00000508546 FOXRED1Q96CU9 486 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-211ENST00000508546 SLAMF6Q96DU3 332 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 RBMXL1Q96E39 390 aaKnown RBP7.55□□□□□ -1.2
NEDD9-211ENST00000508546 MALSU1Q96EH3 234 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 SDSLQ96GA7 329 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 IFT27Q9BW83 186 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 SP140LQ9H930 580 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 INPP5EQ9NRR6 644 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 CENPMQ9NSP4 180 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 NDUFAF4Q9P032 175 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 ZNF222Q9UK12 451 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 FAM32AQ9Y421 112 aaKnown RBP7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TBL2Q9Y4P3 447 aaKnown RBP7.55□□□□□ -1.2
NEDD9-211ENST00000508546 N6AMT1Q9Y5N5 214 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 TSSC4Q9Y5U2 329 aaPredicted RBP7.55□□□□□ -1.2
NEDD9-211ENST00000508546 U3KQK5 164 aa7.55□□□□□ -1.2
NEDD9-211ENST00000508546 HUWE1Q7Z6Z7 4374 aaKnown RBP7.54□□□□□ -1.2
NEDD9-211ENST00000508546 TVP23AA6NH52 213 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 F2RL2O00254 374 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 GSTA4O15217 222 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 RHBDL1O75783 438 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 CLIC3O95833 236 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 APOC1P02654 83 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 ANXA2P07355 339 aaKnown RBP7.54□□□□□ -1.2
NEDD9-211ENST00000508546 NCK1P16333 377 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 GLRA1P23415 457 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 HOXD3P31249 432 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-211ENST00000508546 CX3CR1P49238 355 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 ENTPD1P49961 510 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 RAB13P51153 203 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 ERVFRD-1P60508 538 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 RPL31P62899 125 aaKnown RBP7.54□□□□□ -1.2
NEDD9-211ENST00000508546 BLCAPP62952 87 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 SLC34A1Q06495 639 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.54□□□□□ -1.2
NEDD9-211ENST00000508546 ARSJQ5FYB0 599 aaPredicted RBP7.54□□□□□ -1.2
NEDD9-211ENST00000508546 TCTEX1D4Q5JR98 221 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 LYPD4Q6UWN0 246 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 CALHM1Q8IU99 346 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 PROKR2Q8NFJ6 384 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 ZNRF4Q8WWF5 429 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 OR5P3Q8WZ94 311 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 DPF1Q92782 380 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 C7orf34Q96L11 122 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 NSMCE2Q96MF7 247 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 RGCCQ9H4X1 137 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 ABCB10Q9NRK6 738 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 C19orf12Q9NSK7 152 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 USE1Q9NZ43 259 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 STARD9Q9P2P6 4700 aa7.54□□□□□ -1.2
NEDD9-211ENST00000508546 TCRBV5S2A0A599 114 aa7.53□□□□□ -1.2
NEDD9-211ENST00000508546 TCRBV4S1A1TA0A5B7 111 aa7.53□□□□□ -1.2
NEDD9-211ENST00000508546 DHRS12A0PJE2 317 aa7.53□□□□□ -1.2
NEDD9-211ENST00000508546 ODF3BA8MYP8 253 aa7.53□□□□□ -1.2
NEDD9-211ENST00000508546 BAG2O95816 211 aa7.53□□□□□ -1.2
NEDD9-211ENST00000508546 CST4P01036 141 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms