RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 CYB561P49447 251 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 CCR8P51685 355 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 TPI1P60174 286 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 ACVR1Q04771 509 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 PRSS8Q16651 343 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 PGGHGQ32M88 737 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 SFT2D3Q587I9 215 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 VAX1Q5SQQ9 334 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 C1orf94Q6P1W5 598 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 KCNIP4Q6PIL6 250 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 WDR59Q6PJI9 974 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 PGAP1Q75T13 922 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 NEGR1Q7Z3B1 354 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 CENPLQ8N0S6 344 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 CYP4Z2PQ8N1L4 340 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 LINC00301Q8NCQ3 95 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 OR1F12Q8NHA8 337 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 OSTF1Q92882 214 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 CCDC47Q96A33 483 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 PELI1Q96FA3 418 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 CYTH2Q99418 400 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 GPA33Q99795 319 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 SELENOSQ9BQE4 189 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 TUBGCP2Q9BSJ2 902 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 CRACR2AQ9BSW2 395 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 ZSCAN5AQ9BUG6 496 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 ZNF416Q9BWM5 594 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 C1orf21Q9H246 121 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 SPNS1Q9H2V7 528 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 LIN28AQ9H9Z2 209 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 CTPS2Q9NRF8 586 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 KCNIP1Q9NZI2 227 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 PDP1Q9P0J1 537 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 F11RQ9Y624 299 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 U3KQV3 271 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 MED12LQ86YW9 2145 aa2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 HUWE1Q7Z6Z7 4374 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-206ENST00000508524 TRGV5A0A0B4J1U4 118 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 PRSS37A4D1T9 235 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 LRP5LA4QPB2 252 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 RGSL1A5PLK6 1076 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 CETN3O15182 167 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 PIN1P1O15428 100 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 PRPSAP2O60256 369 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 STX10O60499 249 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 EPPINO95925 133 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 HLA-DQB2P05538 268 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 CCL3P10147 92 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 SDC4P31431 198 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 PLGLB1Q02325 96 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 SCGB2A2Q13296 93 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 KRTAP21-2Q3LI59 83 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 RESP18Q5W5W9 173 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 PDPK2PQ6A1A2 396 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 PRMT9Q6P2P2 845 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 CES3Q6UWW8 571 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 FAM151BQ6UXP7 276 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 HSDL2Q6YN16 418 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 NT5DC3Q86UY8 548 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 THOC6Q86W42 341 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 ZNF679Q8IYX0 411 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 FADS6Q8N9I5 356 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 OR52P1PQ8NH57 321 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 OR5W2Q8NH69 310 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 SYNPRQ8TBG9 265 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 AURKBQ96GD4 344 aaPredicted RBP2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 OR2A5Q96R48 311 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 ECSITQ9BQ95 431 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 SNRNP25Q9BV90 132 aaKnown RBP2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 REEP4Q9H6H4 257 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 PROK2Q9HC23 129 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 C14orf105Q9NVL8 296 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 XCL2Q9UBD3 114 aa2.46□□□□□ -2.02
TOPBP1-206ENST00000508524 IGHV3-66A0A0C4DH42 116 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 IGKV1-8A0A0C4DH67 115 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 C7orf66A4D0T2 115 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 H0YGG7 62 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 KLRC4-KLRK1H3BQV0 150 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 CDC7O00311 574 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 MFSD11O43934 449 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 BGLAPP02818 100 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 ALDOBP05062 364 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 IGKV4-1P06312 121 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 GABRA1P14867 456 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 IMPDH1P20839 514 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 UGT2B10P36537 528 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 HSPA9P38646 679 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 CD86P42081 329 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 PRLHRP49683 370 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 COX19Q49B96 90 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 CCSMST1Q4G0I0 132 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 COA6Q5JTJ3 125 aaKnown RBP2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 DNLZQ5SXM8 178 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 PYHIN1Q6K0P9 492 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 AFTPHQ6ULP2 937 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 FAM71AQ8IYT1 594 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 ZDHHC22Q8N966 263 aa2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 TTC29Q8NA56 475 aaPredicted RBP2.45□□□□□ -2.02
TOPBP1-206ENST00000508524 APCDD1LQ8NCL9 501 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms